SETH | SNP Extraction Tool for Human Variations | Topic Modeling library

by rockt Java Version: 1.4.0 License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | SETH Summary

SETH is a Java library typically used in Artificial Intelligence, Topic Modeling applications. SETH has no bugs, it has no vulnerabilities, it has build file available and it has low support. However SETH has a Non-SPDX License. You can download it from GitHub.

SNP Extraction Tool for Human Variations

Support

Quality

Security

License

Reuse

Support

SETH has a low active ecosystem.

It has 26 star(s) with 13 fork(s). There are 8 watchers for this library.

It had no major release in the last 12 months.

There are 14 open issues and 16 have been closed. On average issues are closed in 155 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of SETH is 1.4.0

Quality

SETH has 0 bugs and 0 code smells.

Security

SETH has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

SETH code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

SETH has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

SETH releases are available to install and integrate.

Build file is available. You can build the component from source.

Top functions reviewed by kandi - BETA

kandi has reviewed SETH and discovered the below as its top functions. This is intended to give you an instant insight into SETH implemented functionality, and help decide if they suit your requirements.

Main entry point for rotation
Retrieves the dbSN associated with a given gene ID
Returns a list of uniprot features for a given entity ID
Connects to database
Entry point to the database
Format duration in human readable format
Close the ResultSet
Main method for testing
Reads the mutations from an annotated corpus
Main method to be used to generate a CSV file
Example of the execution of the MutationFinder
Demonstrates how to perform the SMTP
This method is used to determine if the SNP sequences have been normalized
Generate a human readable representation of the mutation mention
Reads chromosome regions and gene IDs from the file
Checks if the given Mutation mention matches
Main method for testing
SQLite database
Main entry point
Main function for testing
Main entry point for testing
Command - line utility
End element
The main method to write the SETH file to a file
Initialize ambiguous mentions
Takes a file and prints a SETH file

Get all kandi verified functions for this library.

SETH Key Features

No Key Features are available at this moment for SETH.

SETH Examples and Code Snippets

No Code Snippets are available at this moment for SETH.

Community Discussions

Trending Discussions on SETH

Get data from pandas on specifics string

Javascript simple if/else statement Quiz Game with 5 questions that outputs results at the end

Goto function isn't working in rawturtle with mixed turtle and tkinter

Only one of two numeric columns is displaying in ggplot2 bar chart using R

How do I create combinations from CSV in python?

How to force update single component react native

Javascript Plotly styling font and font colour

Using a for loop to create a new column in pandas dataframe

How to find parent's youngest child's name

python plotly dash treemap get selected child label

QUESTION

Get data from pandas on specifics string

Asked 2022-Apr-16 at 02:48

So here is my code.

...

ANSWER

Answered 2022-Apr-16 at 02:48

import pandas as pd

data = pd.read_csv('cast.csv')
data_2 = data[data['type'] == 'actor']
output = data_2[data['name'].str.startswith('Aaron')]
print(output)

Source https://stackoverflow.com/questions/71890633

QUESTION

Javascript simple if/else statement Quiz Game with 5 questions that outputs results at the end

Asked 2022-Mar-21 at 23:00

Anyone care to help me get this code running correctly? Just simple if/else statements Javascript. I have tried attaching a "do {" before each of the next questions, but I couldn't get that to work. It keeps saying that "Uncaught SyntaxError: Unexpected end of input".

...

ANSWER

Answered 2022-Mar-21 at 23:00

Your do statement is incorrect. It needs the while keyword at the end.

So, you can change your code to the template below to get it working.

Source https://stackoverflow.com/questions/71565028

QUESTION

Goto function isn't working in rawturtle with mixed turtle and tkinter

Asked 2022-Feb-26 at 16:47

I am trying to make tic tac toe project in mixed turtle and tkinter and it is going very well by now, I have a bug now. I made 9 buttons for every field with coordinates, but whenever I click any button it goes to the first written position.

...

ANSWER

Answered 2022-Feb-26 at 16:47

You have problem because all Buttons run the same callback_and_hide but every Button should run diferent function callback_and_hide2, callback_and_hide3 , etc. That's all.

Source https://stackoverflow.com/questions/71275700

QUESTION

Only one of two numeric columns is displaying in ggplot2 bar chart using R

Asked 2022-Feb-20 at 15:25

I have a dataset with three columns. One is Player; the second is Run_Value; the third is Num_years. I want Player to appear on the Y axis, Run_Value as a bar on the X axis, and Num_Years to appear either as a smaller bar within the Run_Value bar or next to it. Below is how my bar chart is currently appearing. The Num_Years data is not displaying, which is what I need.

In addition, if at the end of each Run_Value bar its Run_Value could appear, that would be great.

I have searched Stackoverflow for a comparable question, but could not find one. If one exists, please share it link.

--I cannot see the two uploaded images on my screen and am not sure why.

Dplyr Code:

...

ANSWER

Answered 2022-Feb-18 at 02:37

You may want to avoid having two x-axis. Consider the alternative of using facet_wrap. Note you first need to put your data into a long format. I've used df for your dataset.

Source https://stackoverflow.com/questions/71165757

QUESTION

How do I create combinations from CSV in python?

Asked 2022-Feb-20 at 05:33

I have a python script that imports a CSV file to a dictionary like so:

...

ANSWER

Answered 2022-Feb-20 at 05:33

Here is code to iteratively do what you have asked. It uses a depth-first search (DFS) approach to traverse the input data and compile a list of all possible five-person groups meeting the selection criteria.

Someone with no programming experience would be hard-pressed to come up with this on their own. Alternative implementations using recursion instead of an explicit stack variable may also be out of reach for a beginning programmer. Nevertheless, hopefully this answer gives you a sense of how to approach problems like this.

Source https://stackoverflow.com/questions/71189833

QUESTION

How to force update single component react native

Asked 2022-Jan-31 at 21:17

I'm using 2 usestate in my component

...

ANSWER

Answered 2022-Jan-31 at 21:17

I guess the problem is that you try to access h directly instead of using setH.

This should work:

Source https://stackoverflow.com/questions/70932780

QUESTION

Javascript Plotly styling font and font colour

Asked 2022-Jan-27 at 13:58

...

ANSWER

Answered 2022-Jan-27 at 13:58

You can use the insidetextfont property of the sunburst Trace :

Source https://stackoverflow.com/questions/70878913

QUESTION

Using a for loop to create a new column in pandas dataframe

Asked 2022-Jan-20 at 16:40

I have been trying to create a web crawler to scrape data from a website called Baseball Reference. When defining my crawler I realized that the different players have a unique id at the end of their URL containing the first 6 letters of their last name, three zeroes and the first 3 letters of their first name.

I have a pandas dataframe already containing columns 'first' and 'last' containing each players first and last names along with a lot of other data that i downloaded from this same website.

my def for my crawler function is as follows so far:

...

ANSWER

Answered 2022-Jan-20 at 16:40

As stated in the comments, I wouldn't try to create a function to make the ids, as there will likely be some "quirky" ones in there that might not follow that logic.

If you're just go through each letter search they have it divided by and get the id directly by the player url.

Source https://stackoverflow.com/questions/70748992

QUESTION

How to find parent's youngest child's name

Asked 2022-Jan-17 at 11:15

I have a people table shown below.

...

ANSWER

Answered 2022-Jan-17 at 11:15

You can use ROW_NUMBER() function to number records.

This numbering is based on motherId,fatherId which is sorted by age column.

After that, you can extract the numbers 1 of each family.

Use this:

Source https://stackoverflow.com/questions/70737092

QUESTION

python plotly dash treemap get selected child label

Asked 2022-Jan-15 at 07:17

I'm trying to use a plotly treemap within dash. When the user selects a subgroup in the treemap by clicking on it, the treemap zooms in on the selected section. Is there a way for me to get the user's selection and use that as an input into a Dash callback?

For example, here is code for a treemap in Dash:

...

ANSWER

Answered 2022-Jan-15 at 07:17

You could use the dcc.Graph's clickData property in your callback

clickData (dict; optional): Data from latest click event. Read-only.

Source https://stackoverflow.com/questions/70647874

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install SETH

You can download it from GitHub.
You can use SETH like any standard Java library. Please include the the jar files in your classpath. You can also use any IDE and you can run and debug the SETH component as you would do with any other Java program. Best practice is to use a build tool that supports dependency management such as Maven or Gradle. For Maven installation, please refer maven.apache.org. For Gradle installation, please refer gradle.org .

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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