scipy-cookbook | Scipy Cookbook | Code Editor library

 by   scipy Jupyter Notebook Version: Current License: Non-SPDX

kandi X-RAY | scipy-cookbook Summary

kandi X-RAY | scipy-cookbook Summary

scipy-cookbook is a Jupyter Notebook library typically used in Editor, Code Editor, Jupyter applications. scipy-cookbook has no bugs, it has no vulnerabilities and it has low support. However scipy-cookbook has a Non-SPDX License. You can download it from GitHub.

This is a conversion and second life of SciPy Cookbook (previously at as a bunch of Ipython notebooks. It can be found live at
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              scipy-cookbook has a low active ecosystem.
              It has 429 star(s) with 177 fork(s). There are 53 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 5 open issues and 12 have been closed. On average issues are closed in 33 days. There are 1 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of scipy-cookbook is current.

            kandi-Quality Quality

              scipy-cookbook has 0 bugs and 0 code smells.

            kandi-Security Security

              scipy-cookbook has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              scipy-cookbook code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              scipy-cookbook has a Non-SPDX License.
              Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

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              scipy-cookbook releases are not available. You will need to build from source code and install.
              Installation instructions are not available. Examples and code snippets are available.

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            scipy-cookbook Examples and Code Snippets

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            Community Discussions

            QUESTION

            Operate on Numpy array from C extension without memory copy
            Asked 2021-Dec-21 at 16:06

            I'm new to C extensions for NumPy and I'm wondering if the following workflow is possible.

            1. Pre-allocate an array in NumPy
            2. Pass this array to a C extension
            3. Modify array data in-place in C
            4. Use the updated array in Python with standard NumPy functions

            In particular, I'd like to do this while ensuring I'm making zero new copies of the data at any step.

            I'm familiar with boilerplate on the C side such as PyModuleDef, PyMethodDef, and the PyObject* arguments but a lot of examples I've seen involve coercion to C arrays which to my understanding involves copying and/or casting. I'm also aware of Cython though I don't know if it does similar coercions or copies under the hood. I'm specifically interested in simple indexed get- and set- operations on ndarray with numeric (eg. int32) values.

            Could someone provide a minimal working example of creating a NumPy array, modifying it in-place in a C extension, and using the results in Python subsequently?

            ...

            ANSWER

            Answered 2021-Dec-21 at 16:06

            Cython doesn't create new copies of numpy arrays unless you specifically request it to do so using numpy functions, so it is as efficient as it can be when dealing with numpy arrays, see Working with NumPy

            choosing between writing raw C module and using cython depends on the purpose of the module written. if you are writing a module that will only be used by python to do a very small specific task with numpy arrays as fast as possible, then by all means do use cython, as it will automate registering the module correctly as well as handle the memory and prevent common mistakes that people do when writing C code (like memory management problems), as well as automate the compiler includes and allow an overall easier access to complicated functionality (like using numpy iterators).

            however if your module is going to be used in other languages and has to be run independently from python and has to be used with python without any overhead, and implements some complex C data structures and requires a lot of C functionality then by all means create your own C extension (or even a dll), and you can pass pointers to numpy arrays from python (using numpy.ctypeslib.as_ctypes_type), or pass the python object itself and return it (but you must make a .pyd/so instead of dll), or even create numpy array on C side and have it managed by python (but you will have to understand the numpy C API).

            Source https://stackoverflow.com/questions/70431430

            QUESTION

            Error Message: cannot import name 'hold' from 'pylab
            Asked 2021-Mar-28 at 14:19

            I am learning how to solve systems of differential equations in Python. I took a code from online (https://scipy-cookbook.readthedocs.io/items/CoupledSpringMassSystem.html) and tried to run it. I get the error message: "cannot import name 'hold' from 'pylab'". I am not sure what is wrong with the code. Can anyone tell me what is incorrect in the code below:

            ...

            ANSWER

            Answered 2021-Mar-28 at 14:19

            from their website, hold function has been Deprecated since version 2.0

            Deprecated since version 2.0: pyplot.hold is deprecated. Future behavior will be consistent with the long-time default: plot commands add elements without first clearing the Axes and/or Figure.

            Source https://stackoverflow.com/questions/66842357

            QUESTION

            How to rotate actor on tvtk rendered scene with Mayavi in Python?
            Asked 2020-Nov-05 at 10:30

            I played a bit with Mayavi and particularly with tvtk but I struggle finding examples in which glyphs are placed on the scene at different orientation than default.

            Based on this example I prepared the following scene with two cyllinders, one red and one blue,

            ...

            ANSWER

            Answered 2020-Nov-05 at 10:30

            Ok, it turned out Actor accepts orientation argument which is in degrees (not in radians!). Also, the position of the actor has to be specified when actor is created and not when glyph is created!

            Source https://stackoverflow.com/questions/64639371

            QUESTION

            Python scipy solve_ivp / odeint: print & plot time/solution-dependent parameters
            Asked 2020-Oct-10 at 10:52

            I have been using scipy.integrate.solve_ivp to solve a system of 2nd order ODEs.

            Assuming the code available here (note this uses odeint, but similar approach with solve_ivp): https://scipy-cookbook.readthedocs.io/items/CoupledSpringMassSystem.html

            Now, making some parameters (b1 and b2) time & solution-dependent, say: e.g.

            ...

            ANSWER

            Answered 2020-Oct-10 at 10:52
            New ODE Solver API

            Adapting your code to use solve_ivp (which is the modern scipy API to solve ODE) we can solve the system in a non intrusive way:

            Source https://stackoverflow.com/questions/64280536

            QUESTION

            Generating Correlated Random Samples
            Asked 2020-Jul-18 at 11:55

            I read this tutorial https://scipy-cookbook.readthedocs.io/items/CorrelatedRandomSamples.html on how to get a matrix C so that C*C^T = R, with R being a given covariance matrix. The code example implements two differents methods, Cholesky decomposition or using the eigenvalues. To my suprise printing the resulting C of the two different methods gives me two different matrices:

            Eigenvalue method result:

            ...

            ANSWER

            Answered 2020-Jul-18 at 10:46

            I think I meanwhile found the answer. The matrix decompostion of the covariance matrix R into R = CC^T is not unambiguous. Different methods as calculating the Cholesky Decomposition or using eigenvalues yield different matrices C that fit the formula R = CC^T.

            Source https://stackoverflow.com/questions/62137580

            QUESTION

            np.ones(size, 'd') what does the 'd' do?
            Asked 2020-Jul-16 at 12:50

            Following this post I'm trying to implement a one-dimensional smoothing algorithm. When creating a flat window for a simple moving average the call is as follows:

            ...

            ANSWER

            Answered 2020-Jul-16 at 12:49
            numpy.ones(shape, dtype=None, order='C')
            

            Source https://stackoverflow.com/questions/62935015

            QUESTION

            How can I draw an "eye diagram"-like plot in pandas?
            Asked 2020-May-03 at 14:04

            I have a bunch of similar curves, for example 1000 sine waves with slightly varying amplitude, frequency and phases, they look like as in this plot:

            In the above plot the color of each sine wave is from the standard pandas colormap; I would like to get a plot where the color is related to the "density" of the curves.

            My first idea is to imitate an old oscilloscope screen (search for "persistence mode" or look at https://en.wikipedia.org/wiki/Eye_pattern for some background):

            and so I set one color for all the curves:

            but the plot is "flat" and the "density" information is not so good.

            I would really like a plot like this one:

            In the above plot the yellow colour means that a number of curves between 25 and 30 "pass" through the same point (or the same pixel). I hand-made the above plot and I am asking whether it can be done better and more directly with pandas or matplotlib.

            Above figures are made with this program, it takes a while (a dozen or seconds) because the Bresenham's line algorithm is not optimized.

            ...

            ANSWER

            Answered 2020-May-03 at 14:04

            Matplotlib's hist2d calculated the binning quite efficiently. The parameter bins can set the number of bins in both x and y directions.

            Drawing the curves with a thin line and combining them using a small alpha value is another approach.

            Source https://stackoverflow.com/questions/61574246

            QUESTION

            How to find the value of an ODE system at a specific time
            Asked 2020-Mar-27 at 02:58

            I am learning how to code on python and I am trying to figure out how I could find the sum of solutions from an ODE system at a specific time.

            For example, this is from the SciPy Cookbook the example is called "Modelling a Zombie Apocalypse" https://scipy-cookbook.readthedocs.io/items/Zombie_Apocalypse_ODEINT.html

            Here is part of the code from the website:

            ...

            ANSWER

            Answered 2020-Mar-27 at 02:58

            You just need to do S[4] for living population and Z[4] for zombie population. S and Z are the approximation values for those variable after solving the ODE system at each time t.

            Remember that values may not be int so solution may not make sense to the physical problem:

            Source https://stackoverflow.com/questions/60879019

            QUESTION

            Problem using opencv in a c-extension for python?
            Asked 2020-Mar-15 at 20:51

            I'm trying to write a simple python c-extension which includes some opencv code. Here is my c++ code:

            ...

            ANSWER

            Answered 2020-Mar-15 at 20:51

            I found the answer.

            Looks like Pythons Extension class from distutils.core module hass two additional input arguments for libraries which are library_dirs and libraries.

            So I just had to change my setup.py code as below:

            Source https://stackoverflow.com/questions/60693299

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

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            Install scipy-cookbook

            You can download it from GitHub.

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            Alternatively open an issue and attach (drag-and-drop) a fixed notebook file. Run ``python build.py --html`` to generate HTML output to ``_build/html``. The conversion of the wiki content was originally done by Matti Pastell: https://github.com/mpastell/SciPy-CookBook.
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