23andme-impute | Scripts and advice to run IMPUTE2 on 23 and me raw data

by johnlees Perl Version: Current License: No License

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kandi X-RAY | 23andme-impute Summary

23andme-impute is a Perl library. 23andme-impute has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

Scripts and advice to run IMPUTE2 on 23 and me raw data. Imputes whole genome SNPs from the raw data of ~450 000 SNPs typed by 23andme, and also phases the typed sites. This is a computationally heavy task, and so running output commands in parallel is recommended. Would impute the genome from 23andme_rawdata.txt, which is a male subject (homozygous X chromosome, has Y chromosome data) and then runs the analysis in parallel over four separate threads.

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Quality

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Support

23andme-impute has a low active ecosystem.

It has 17 star(s) with 2 fork(s). There are 3 watchers for this library.

It had no major release in the last 6 months.

There are 1 open issues and 1 have been closed. On average issues are closed in 5 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of 23andme-impute is current.

Quality

23andme-impute has no bugs reported.

Security

23andme-impute has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

23andme-impute does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

23andme-impute releases are not available. You will need to build from source code and install.

Installation instructions are not available. Examples and code snippets are available.

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23andme-impute Key Features

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23andme-impute Examples and Code Snippets

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Community Discussions

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Vulnerabilities

No vulnerabilities reported

Install 23andme-impute

You can download it from GitHub.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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