BioPARKIN | related parameter estimation in large kinetic networks

by CSB-at-ZIB Python Version: Current License: LGPL-3.0

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | BioPARKIN Summary

BioPARKIN is a Python library. BioPARKIN has no bugs, it has no vulnerabilities, it has a Weak Copyleft License and it has low support. However BioPARKIN build file is not available. You can download it from GitHub.

BioPARKIN is the graphical user interface (GUI) building upon PARKINcpp. PARKINcpp is another of our projects and can be found at the accompanying github repository. PARKINcpp is the numerical core that is used by BioPARKIN. It's written in performance-optimized C++ and is also available under the LGPL 3.0. We decided to split the projects in two because the PARKINcpp library might be useful on its own (for integrating in other software tools, etc.).

Support

Quality

Security

License

Reuse

Support

BioPARKIN has a low active ecosystem.

It has 3 star(s) with 5 fork(s). There are 2 watchers for this library.

It had no major release in the last 6 months.

There are 39 open issues and 38 have been closed. On average issues are closed in 5 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of BioPARKIN is current.

Quality

BioPARKIN has no bugs reported.

Security

BioPARKIN has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

BioPARKIN is licensed under the LGPL-3.0 License. This license is Weak Copyleft.

Weak Copyleft licenses have some restrictions, but you can use them in commercial projects.

Reuse

BioPARKIN releases are not available. You will need to build from source code and install.

BioPARKIN has no build file. You will be need to create the build yourself to build the component from source.

Top functions reviewed by kandi - BETA

kandi has reviewed BioPARKIN and discovered the below as its top functions. This is intended to give you an instant insight into BioPARKIN implemented functionality, and help decide if they suit your requirements.

Return the data for a given index
Returns the active parameter set
Validates the token
Returns the constraint lower bound
Setup the ui
Translates the ui
Returns the data for the given index
Returns the initial concentration of species
Setup the UI
Translate the ui
Return the header data
Update the selection of the selectionModel
Creates the networkx graph
Helper method to update the model
Builds the project
Delete all source files in path
Translate the given file to the latest version
Update file menu
Print out usage information
Sets data at given index
Create the editor for the given index
Return the data for the given index
Creates ODE
Update data sources
Sets the parameter value at the given index
Sets the value at index

Get all kandi verified functions for this library.

BioPARKIN Key Features

No Key Features are available at this moment for BioPARKIN.

BioPARKIN Examples and Code Snippets

No Code Snippets are available at this moment for BioPARKIN.

Community Discussions

No Community Discussions are available at this moment for BioPARKIN.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install BioPARKIN

You can download it from GitHub.
You can use BioPARKIN like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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