CellTics | Integrated Diagnostics at Mass General Hospital NGS tools
kandi X-RAY | CellTics Summary
kandi X-RAY | CellTics Summary
CellTics is a Python library. CellTics has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can download it from GitHub.
Center for Integrated Diagnostics at Mass General Hospital NGS tools.
Center for Integrated Diagnostics at Mass General Hospital NGS tools.
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Quality
Security
License
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Support
CellTics has a low active ecosystem.
It has 3 star(s) with 3 fork(s). There are 2 watchers for this library.
It had no major release in the last 6 months.
There are 3 open issues and 4 have been closed. On average issues are closed in 10 days. There are 2 open pull requests and 0 closed requests.
It has a neutral sentiment in the developer community.
The latest version of CellTics is current.
Quality
CellTics has no bugs reported.
Security
CellTics has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
License
CellTics is licensed under the BSD-3-Clause License. This license is Permissive.
Permissive licenses have the least restrictions, and you can use them in most projects.
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CellTics releases are not available. You will need to build from source code and install.
Build file is available. You can build the component from source.
Installation instructions, examples and code snippets are available.
Top functions reviewed by kandi - BETA
kandi has reviewed CellTics and discovered the below as its top functions. This is intended to give you an instant insight into CellTics implemented functionality, and help decide if they suit your requirements.
- Implements the BAM
- Convert FASTA files to fat data
- Combine vcf files into individual calls
- Merge multiple BAM files using multiprocessing
- Return the CLI for the given command name
- Check if script has CLI method
- List all CLI commands
- Check if a single variant has a variant
- Get the location of a read in a read
- Return a dictionary mapping variant IDs to their reverse id
- Return a unique identifier for a variant
- Get the base position from a read
Get all kandi verified functions for this library.
CellTics Key Features
No Key Features are available at this moment for CellTics.
CellTics Examples and Code Snippets
No Code Snippets are available at this moment for CellTics.
Community Discussions
No Community Discussions are available at this moment for CellTics.Refer to stack overflow page for discussions.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install CellTics
If you receive an error pertaining to lzma.h you may need to disable lzma and try python setup.py install again. (This occurs on MacOS Mojave).
Support
Errors are not very informative when masked by the python multithreading module. Run vargroup with --debug and error messages are more informative.
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