cellpose-napari | napari plugin for cellpose

by MouseLand Python Version: Current License: BSD-3-Clause

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | cellpose-napari Summary

cellpose-napari is a Python library. cellpose-napari has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can download it from GitHub.

napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool

Support

Quality

Security

License

Reuse

Support

cellpose-napari has a low active ecosystem.

It has 13 star(s) with 2 fork(s). There are 4 watchers for this library.

It had no major release in the last 6 months.

There are 1 open issues and 0 have been closed. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of cellpose-napari is current.

Quality

cellpose-napari has 0 bugs and 0 code smells.

Security

cellpose-napari has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

cellpose-napari code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

cellpose-napari is licensed under the BSD-3-Clause License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

cellpose-napari releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Installation instructions, examples and code snippets are available.

It has 376 lines of code, 20 functions and 6 files.

It has low code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed cellpose-napari and discovered the below as its top functions. This is intended to give you an instant insight into cellpose-napari implemented functionality, and help decide if they suit your requirements.

Wrapper for cellpose .
Load cellpose data .
Reads a log file .
Provide sample data .
Factory for napari devices .

Get all kandi verified functions for this library.

cellpose-napari Key Features

No Key Features are available at this moment for cellpose-napari.

cellpose-napari Examples and Code Snippets

No Code Snippets are available at this moment for cellpose-napari.

Community Discussions

No Community Discussions are available at this moment for cellpose-napari.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install cellpose-napari

Install an Anaconda distribution of Python -- Choose Python 3 and your operating system. Note you might need to use an anaconda prompt if you did not add anaconda to the path.
Download the environment.yml file from the repository. You can do this by cloning the repository, or copy-pasting the text from the file into a text document on your local computer.
Open an anaconda prompt / command prompt with conda for python 3 in the path
Change directories to where the environment.yml is and run conda env create -f environment.yml
To activate this new environment, run conda activate cellpose-napari
You should see (cellpose-napari) on the left side of the terminal line.
Follow steps from above to install the dependencies. In the github repository, run pip install -e . and the github version will be installed. If you want to go back to the pip version of cellpose-napari, then say pip install cellpose-napari.