shortest-path | Finding shortest paths with Graph Networks | Machine Learning library

 by   Octavian-ai Python Version: Current License: Unlicense

kandi X-RAY | shortest-path Summary

kandi X-RAY | shortest-path Summary

shortest-path is a Python library typically used in Artificial Intelligence, Machine Learning, Deep Learning, Pytorch, Tensorflow applications. shortest-path has no bugs, it has no vulnerabilities, it has a Permissive License and it has high support. However shortest-path build file is not available. You can download it from GitHub.

In this article we show how a Graph Network with attention read and write can perform shortest path calculations. This network performs this task with 99.91% accuracy after minimal training. Here at Octavian we believe that graphs are a powerful medium for representing diverse knowledge (for example BenevolentAI uses them to represent pharmaceutical research and knowledge). Neural networks are a way to create functions that no human could write. They do this by harnessing the power of large datasets. On problems for which we have capable neural models, we can use example inputs and outputs to train the network to learn a function that transforms those inputs into those outputs, and hopefully generalizes to other unseen inputs. We need to be able to build neural networks that can learn functions on graphs. Those neural networks need the right inductive biases so that they can reliably learn useful graph functions. With that foundation, we can build powerful neural graph systems. Here we present a "Graph network with attention read and write", a simple network that can effectively compute shortest path. It is an example of how to combine different neural network components to make a system that readily learns a classical graph algorithm. We present this network both as a novel system in of itself, but more importantly as the basis for further investigation into effective neural graph computation. Read our extensive article about this architecture. Download the pre-compiled YAML dataset or the fully-compiled TFRecords dataset. Data is expected to live in input_data/processed/StationShortestCount/.
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            kandi-support Support

              shortest-path has a highly active ecosystem.
              It has 82 star(s) with 32 fork(s). There are 6 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 3 open issues and 1 have been closed. There are no pull requests.
              It has a positive sentiment in the developer community.
              The latest version of shortest-path is current.

            kandi-Quality Quality

              shortest-path has 0 bugs and 134 code smells.

            kandi-Security Security

              shortest-path has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              shortest-path code analysis shows 0 unresolved vulnerabilities.
              There are 7 security hotspots that need review.

            kandi-License License

              shortest-path is licensed under the Unlicense License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              shortest-path releases are not available. You will need to build from source code and install.
              shortest-path has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions are not available. Examples and code snippets are available.
              shortest-path saves you 1024 person hours of effort in developing the same functionality from scratch.
              It has 2325 lines of code, 213 functions and 43 files.
              It has high code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed shortest-path and discovered the below as its top functions. This is intended to give you an instant insight into shortest-path implemented functionality, and help decide if they suit your requirements.
            • Wrapper function for model_fn
            • A basic decoding function
            • Execute the reason
            • Return a mapping of tap sizes
            • Performs prediction on input records
            • Print all features
            • Returns an estimator
            • Prints tap_dict
            • Get command line arguments
            • Generate arguments based on the given arguments
            • Return the hash of the git repository
            • Add positional encoding
            • Get git hash from git
            • A tensorflow control flow
            • Layer normalize tensor
            • Parse a single example
            • Calculate mi_deep_depth
            • Convert ids to English
            • Print a table
            • Return the output size
            • Resample the data
            • Calculate the right shift
            • Build data
            • Train the model
            • Generate the query
            • Make bidirectional embedding
            Get all kandi verified functions for this library.

            shortest-path Key Features

            No Key Features are available at this moment for shortest-path.

            shortest-path Examples and Code Snippets

            No Code Snippets are available at this moment for shortest-path.

            Community Discussions

            QUESTION

            Shortest path for timedelta-weighted edges failed by using integer default weight despite all edge attributes existing
            Asked 2022-Feb-21 at 11:14

            When I want to compute the shortest path through a timedelta-weighted graph in networkx like the following

            ...

            ANSWER

            Answered 2022-Feb-21 at 11:14

            Networkx initializes the path length to 0 when it starts (that’s the distance from the source to itself). Then to calculate the length of a path, it successively adds the weight of each edge.

            In your case at the very first edge it cannot add 0 to datetime.timedelta(seconds=1). Hence the error about not adding an int and datetime.timedelta. If you convert the weight into a numerical value then it runs fine.

            Source https://stackoverflow.com/questions/71204798

            QUESTION

            Shortest Path with Dijkstra’s Algorithm from a dataframe
            Asked 2022-Feb-01 at 19:36

            I am trying to find shortest path between graph nodes using Dijkstra's Algorithm, by using the code enclosed in the following article:

            https://www.r-bloggers.com/2020/10/finding-the-shortest-path-with-dijkstras-algorithm/

            But this code creates the graph from an edgelist. Instead I would like to create the graph from a dataframe like this:

            ...

            ANSWER

            Answered 2022-Feb-01 at 19:15

            Perhaps you can try this

            Source https://stackoverflow.com/questions/70942564

            QUESTION

            Find all shortest paths between all pairs of nodes in NetworkX
            Asked 2021-Dec-31 at 13:02

            I am trying to get all shortest paths between all pairs of nodes in an undirected unweighted graph. I am currently using nx.all_pairs_shortest_path(), but I don't understand why it only returns one shortest path for every pair of nodes. There are cycles in my graph so there should exist multiple shortest paths between certain nodes. Any suggestions?

            ...

            ANSWER

            Answered 2021-Oct-12 at 16:55

            Iterate over all nodes in the graph:

            Source https://stackoverflow.com/questions/69539672

            QUESTION

            Syntax for creating a new, empty GeoDataFrame
            Asked 2021-Aug-16 at 13:22

            I have a GeoDataFrame (let's call it Destinations) that was made from a point shapefile using GeoPandas. For every feature (correct me if the terminology is wrong) in Destinations, I need to find the nearest node on a graph and save that node to another GeoDataFrame (let's call it Destination_nodes, it will be used later for shortest-path analysis). Presumably, this requires creating a new, blank Destination_nodes GeoDataFrame and appending nodes to it as I loop through Destinations. But what is the syntax for creating a new empty GeoDataFrame?

            ...

            ANSWER

            Answered 2021-Aug-16 at 13:22

            For a GeoDataFrame you need to say which column will be the geometry, i.e. contain features as you say. So you could simply specify the columns of your empty dataframe at creation, without specifying any data:

            Source https://stackoverflow.com/questions/68803345

            QUESTION

            Shortest Route Algo Terribly Slow
            Asked 2021-Aug-12 at 15:00

            first post.

            I wrote a shortest-path script for a Unity game project, and while it works, it gets so slow when applied at scale that it crashes Unity when executed. This is to say, it works slowly for a single test character, but scale is required for the project.

            I didn't really follow any of the known shortest path techniques to create it, rather I did it myself. The way it works is that it spawns a series of recursive methods each containing a for loop to explore each possible node in the network, bringing with each method a pathway and a list of pathways. If the target is found, or if the current path gets longer than a known path, or if a new node has already been inspected, the method terminates.

            Here is some code. I have excluded the method that initially calls this recursive method:

            ...

            ANSWER

            Answered 2021-Aug-12 at 15:00

            I would highly recommend just using Dijkstra since you seem aware of that. It is rather simple to implement, and can be extended to A* that is theoretically optimal.

            I honestly do not understand the code example, so I'm basing this from the description of your algorithm. I apologize if I have misunderstood something.

            Consider an infinite grid, where cells are evaluated in the top, right, bottom, left order. Where the starting node is just left of the target node. A simple depth first algorithm like you describe would evaluate the top-node first, and then the top-node of that one, and so on. Since the grid is infinite it would never never reach the target, even when they are just next to each other. I'm also unsure if it would actually guarantee the shortest path with your termination conditions, since nodes can be reached by multiple paths, and the first one found does not have to be the cheapest.

            A breadth-first algorithm like djikstra would order the evaluated nodes according to the distance from the starting node, so it would quickly reach the target, even with a infinite graph.

            The A* refinement would order the evaluated nodes according the the distance from the starting node + estimated remaining distance , and that is significantly more efficient. But it introduces some complexity, like how the estimation is done. Especially if the weight of the edges has large variations. And there are further refinements that can improve performance by using approximate solutions, or uses some extra knowledge about the graph.

            Source https://stackoverflow.com/questions/68759133

            QUESTION

            Representing a graph with a 2D array
            Asked 2021-Jul-15 at 11:13

            I have a question where I represent a graph in terms of a 2D array. I have a sample as well, but I have no idea, how it works.... This is the graph I am given

            And this is how they represent it using a 2D array

            How does one translate to the other?

            Also, this is a part of an implementation of Dijsktra's algorithm. Here is the code for your reference, it is taken from geeksforgeeks

            ...

            ANSWER

            Answered 2021-Jul-02 at 04:56

            They have used an adjacency matrix to represent an weighted undirected graphs. According to geeksforgeeks:

            Source https://stackoverflow.com/questions/68219376

            QUESTION

            split text by periods except in certain cases
            Asked 2021-Jul-12 at 02:02

            I am currently trying to split a string containing an entire text document by sentences so that I can convert it to a csv. Naturally, I would use periods as the delimiter and perform str.split('.'), however, the document contains abbreviations 'i.e.' and 'e.g.' which I would want to ignore the periods in this case.

            For example,

            Original Sentence: During this time, it became apparent that vanilla shortest-path routing would be insufficient to handle the myriad operational, economic, and political factors involved in routing. ISPs began to modify routing configurations to support routing policies, i.e. goals held by the router’s owner that controlled which routes were chosen and which routes were propagated to neighbors.

            Resulting List: ["During this time, it became apparent that vanilla shortest-path routing would be insufficient to handle the myriad operational, economic, and political factors involved in routing", "ISPs began to modify routing configurations to support routing policies, i.e. goals held by the router’s owner that controlled which routes were chosen and which routes were propagated to neighbors."]

            My only workaround so far is replacing all 'i.e' and 'e.g.' with 'ie' and 'eg' which is both inefficient and grammatically undesirable. I am fiddling with Python's regex library which I suspect holds the answer I desire but my knowledge with it is novice at best.

            It is my first time posting a question on here so I apologize if I am using incorrect format or wording.

            ...

            ANSWER

            Answered 2021-Jul-12 at 02:02

            QUESTION

            Is Seidel's algorithm on wikipedia page incorrect?
            Asked 2021-May-07 at 16:01

            I am trying to use the python program from https://en.wikipedia.org/wiki/Seidel%27s_algorithm .

            ...

            ANSWER

            Answered 2021-May-07 at 16:01

            This implementation worked for me. The code provided on wikipedia has the indexing incorrect. when indexing a numpy matrix to get the i'th , j'th element you need to do A[i,j] not A[i][j]

            Source https://stackoverflow.com/questions/67437377

            QUESTION

            Save shortest path in a "structured file" using networkx and osmnx
            Asked 2021-Apr-07 at 18:02

            I have a multidimensional graph G and a list best_path calculated using the method nx.shortest_path.

            Thanks to this stackexchange post, I am exporting the x and y coordinates of my route in a simple ascii file using json.dumps:

            ...

            ANSWER

            Answered 2021-Apr-07 at 18:02

            My suggestion would be to create the induced subgraph of your path, i.e.,

            Source https://stackoverflow.com/questions/66982521

            QUESTION

            JavaScript: get shortest path in binary matrix using BFS
            Asked 2021-Mar-05 at 19:46

            I been grinding leetcode using JavaScript and I was trying to solve this question https://leetcode.com/problems/shortest-path-in-binary-matrix/

            This question was asking to return the distance or the length of the shortest path, and I solved it. Here is my answer

            ...

            ANSWER

            Answered 2021-Mar-05 at 19:46

            The main idea is to make visited a Map instead of a Set, and to register as value the coordinates of the previous node on the path to that visited node.

            For that to work I find it easier to make the visited mark one step earlier than you did: make the mark when you put the cell on the queue, not when you pull it from the queue.

            Once you arrive at the destination you can use the Map as a linked list, and walk back along the path towards the source node. That way you can reconstruct the path. Then just remains to reverse it.

            Here is your code with the modifications marked with a comment:

            Source https://stackoverflow.com/questions/66497915

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install shortest-path

            You can download it from GitHub.
            You can use shortest-path like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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