bonito | A PyTorch Basecaller for Oxford Nanopore Reads

by TimD1 Python Version: Current License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | bonito Summary

bonito is a Python library. bonito has no bugs, it has no vulnerabilities, it has build file available and it has low support. However bonito has a Non-SPDX License. You can download it from GitHub.

A PyTorch Basecaller for Oxford Nanopore Reads. If a reference is provided in either .fasta or .mmi format then bonito will output in sam format.

Support

Quality

Security

License

Reuse

Support

bonito has a low active ecosystem.

It has 0 star(s) with 0 fork(s). There are 1 watchers for this library.

It had no major release in the last 6 months.

bonito has no issues reported. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of bonito is current.

Quality

bonito has no bugs reported.

Security

bonito has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

bonito has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

bonito releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Installation instructions are not available. Examples and code snippets are available.

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bonito Key Features

No Key Features are available at this moment for bonito.

bonito Examples and Code Snippets

No Code Snippets are available at this moment for bonito.

Community Discussions

No Community Discussions are available at this moment for bonito.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install bonito

You can download it from GitHub.
You can use bonito like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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