porekit-python | A pythonic toolkit for working with Oxford Nanopore Data
kandi X-RAY | porekit-python Summary
kandi X-RAY | porekit-python Summary
porekit-python is a Python library. porekit-python has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can download it from GitHub.
A pythonic toolkit for working with Oxford Nanopore Data
A pythonic toolkit for working with Oxford Nanopore Data
Support
Quality
Security
License
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Support
porekit-python has a low active ecosystem.
It has 7 star(s) with 2 fork(s). There are 7 watchers for this library.
It had no major release in the last 6 months.
There are 0 open issues and 1 have been closed. There are no pull requests.
It has a neutral sentiment in the developer community.
The latest version of porekit-python is current.
Quality
porekit-python has no bugs reported.
Security
porekit-python has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
License
porekit-python is licensed under the ISC License. This license is Permissive.
Permissive licenses have the least restrictions, and you can use them in most projects.
Reuse
porekit-python releases are not available. You will need to build from source code and install.
Build file is available. You can build the component from source.
Top functions reviewed by kandi - BETA
kandi has reviewed porekit-python and discovered the below as its top functions. This is intended to give you an instant insight into porekit-python implemented functionality, and help decide if they suit your requirements.
- Collect metadata from a given file
- Find all files in path
- Return metadata for each plugin
- Get metadata records from fasta files
- Return the full fastq file
- Get the fastq value from a file
- Retrieve complement fastq file
- Get fastq file
- Squiggly squick plots
- Returns the Read node
- Return a pandas DataFrame containing the events in the read node
- Get information about base calling bases
- Convert node to sequence
- Find an analysis base
- Run converter on a FASTA file
- Rename a key
- Return the read information as a dict
- Run analysis on a FASTA file
- Return the read id of this node
Get all kandi verified functions for this library.
porekit-python Key Features
No Key Features are available at this moment for porekit-python.
porekit-python Examples and Code Snippets
No Code Snippets are available at this moment for porekit-python.
Community Discussions
No Community Discussions are available at this moment for porekit-python.Refer to stack overflow page for discussions.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install porekit-python
You can download it from GitHub.
You can use porekit-python like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
You can use porekit-python like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
Support
For any new features, suggestions and bugs create an issue on GitHub.
If you have any questions check and ask questions on community page Stack Overflow .
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