AutoEncoder | Stacked Denoising and Variational Autoencoder | Machine Learning library

 by   arunarn2 Python Version: Current License: No License

kandi X-RAY | AutoEncoder Summary

kandi X-RAY | AutoEncoder Summary

AutoEncoder is a Python library typically used in Telecommunications, Media, Media, Entertainment, Artificial Intelligence, Machine Learning, Deep Learning, Tensorflow applications. AutoEncoder has no bugs, it has no vulnerabilities and it has low support. However AutoEncoder build file is not available. You can download it from GitHub.

"Autoencoding" is a data compression algorithm where the compression and decompression functions are 1) data-specific, 2) lossy, and 3) learned automatically from examples rather than engineered by a human. Additionally, in almost all contexts where the term "autoencoder" is used, the compression and decompression functions are implemented with neural networks. To build an autoencoder, you need three things: an encoding function, a decoding function, and a distance function between the amount of information loss between the compressed representation of your data and the decompressed representation (i.e. a "loss" function). The encoder and decoder will be chosen to be parametric functions (typically neural networks), and to be differentiable with respect to the distance function, so the parameters of the encoding/decoding functions can be optimize to minimize the reconstruction loss, using Stochastic Gradient Descent. It's simple! And you don't even need to understand any of these words to start using autoencoders in practice. Auto-encoders have great potential to be useful and one application is in unsupervised feature learning, where we try to construct a useful feature set from a set of unlabelled images. We could use the code produced by the auto-encoder as a source of features. Another possible use for an auto-encoder is to produce a clustering method – we use the auto-encoder codes to cluster the data. Yet another possible use for an auto-encoder is to generate images.
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            kandi-support Support

              AutoEncoder has a low active ecosystem.
              It has 6 star(s) with 2 fork(s). There are no watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              AutoEncoder has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of AutoEncoder is current.

            kandi-Quality Quality

              AutoEncoder has 0 bugs and 3 code smells.

            kandi-Security Security

              AutoEncoder has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              AutoEncoder code analysis shows 0 unresolved vulnerabilities.
              There are 3 security hotspots that need review.

            kandi-License License

              AutoEncoder does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              AutoEncoder releases are not available. You will need to build from source code and install.
              AutoEncoder has no build file. You will be need to create the build yourself to build the component from source.
              It has 285 lines of code, 4 functions and 2 files.
              It has high code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed AutoEncoder and discovered the below as its top functions. This is intended to give you an instant insight into AutoEncoder implemented functionality, and help decide if they suit your requirements.
            • Save images
            • Merge multiple images
            • Return a discrete colormap
            Get all kandi verified functions for this library.

            AutoEncoder Key Features

            No Key Features are available at this moment for AutoEncoder.

            AutoEncoder Examples and Code Snippets

            Masked Autoencoder
            pypidot img1Lines of Code : 30dot img1no licencesLicense : No License
            copy iconCopy
            import torch
            from vit_pytorch import ViT, MAE
            
            v = ViT(
                image_size = 256,
                patch_size = 32,
                num_classes = 1000,
                dim = 1024,
                depth = 6,
                heads = 8,
                mlp_dim = 2048
            )
            
            mae = MAE(
                encoder = v,
                masking_ratio = 0.75,   # t  
            Test for a single autoencoder .
            pythondot img2Lines of Code : 31dot img2no licencesLicense : No License
            copy iconCopy
            def test_single_autoencoder():
                Xtrain, Ytrain, Xtest, Ytest = getKaggleMNIST()
                Xtrain = Xtrain.astype(np.float32)
                Xtest = Xtest.astype(np.float32)
            
                _, D = Xtrain.shape
                autoencoder = AutoEncoder(D, 300, 0)
                init_op = tf.compat.v  
            Test a single autoencoder .
            pythondot img3Lines of Code : 24dot img3no licencesLicense : No License
            copy iconCopy
            def test_single_autoencoder():
                Xtrain, Ytrain, Xtest, Ytest = getKaggleMNIST()
            
                autoencoder = AutoEncoder(300, 0)
                autoencoder.fit(Xtrain, epochs=2, show_fig=True)
            
                done = False
                while not done:
                    i = np.random.choice(len(Xtes  
            Run autoencoder .
            pythondot img4Lines of Code : 23dot img4no licencesLicense : No License
            copy iconCopy
            def main():
              X, Y = util.get_mnist()
            
              model = Autoencoder(784, 300)
              model.fit(X)
            
              # plot reconstruction
              done = False
              while not done:
                i = np.random.choice(len(X))
                x = X[i]
                im = model.predict([x]).reshape(28, 28)
                plt.subplot(  

            Community Discussions

            QUESTION

            Sample-dependent parameters in a custom loss function
            Asked 2022-Apr-09 at 10:07

            I have an autoencoder written using tf.keras, which deals with 2D images. To train the autoencoder I use a custom loss function. To improve the loss function I would like to add two parameters related to the training samples. These data, however, are different for each sample. Thus my data are like this:

            • Image_1, (a_1, b_1)
            • Image_2, (a_2, b_2)
            • ...
            • Image_n, (a_n, b_n)

            Is there a trick how to pass these parameters to the custom loss function? I was trying to use two inputs with one output, however, I have no idea how to refer to the Image and parameters.

            Thank you in advance.

            ...

            ANSWER

            Answered 2022-Apr-08 at 16:57

            If your dataset consists of samples: Image_1, (a_1, b_1)...and so on, you can use a custom training loop and you will have all the flexibility you need. Here is an example with a random custom loss function and dataset, since I do not know the details of your project:

            Source https://stackoverflow.com/questions/71799142

            QUESTION

            How to intercept and feed intra-layer output as target data
            Asked 2022-Mar-25 at 09:10

            Sometimes we need to preprocess the data by feeding them through preprocessing layers. This becomes problematic when your model is an autoencoder, in which case the input is both the x and the y.

            Correct me if I'm wrong, and perhaps there's other ways around this, but it seems obvious to me that if the true input is, say, [1,2,3], and I scale this to 0 and 1: [0,0.5,1], then the model should be evaluating the autoencoder based on x=[0,0.5,1] and y=[0,0.5,1] rather than x=[1,2,3]. So if my model is, for example:

            ...

            ANSWER

            Answered 2022-Mar-25 at 09:10

            You simply have to modify your loss function in order to minimize the difference between predictions and scaled inputs.

            This can be done using model.add_loss.

            Considering a dummy reconstruction task, where we have to reconstruct this data:

            Source https://stackoverflow.com/questions/71518310

            QUESTION

            ValueError: `logits` and `labels` must have the same shape, received ((100, 28, 28, 10) vs (100, 10))
            Asked 2022-Mar-21 at 09:52

            I am attempting to do an anomaly detection NN with the MNIST fashion dataset as my input.

            Currently, my model is as such

            ...

            ANSWER

            Answered 2022-Mar-21 at 09:52

            Since you seem to be working with an Autoencoder, try:

            Source https://stackoverflow.com/questions/71555548

            QUESTION

            Input 0 is incompatible with layer repeat_vector_40: expected ndim=2, found ndim=1
            Asked 2022-Mar-09 at 19:59

            I am developing an LSTM autoencoder model for anomaly detection. I have my keras model setup as below:

            ...

            ANSWER

            Answered 2022-Mar-09 at 19:59

            I think that the problem lies in this line:

            Source https://stackoverflow.com/questions/71413194

            QUESTION

            What is the difference between tf.keras.layers.Input() and tf.keras.layers.Flatten()
            Asked 2022-Mar-03 at 11:06

            I have seen multiple uses of both tf.keras.layers.Flatten() (ex. here) and tf.keras.layers.Input() (ex. here). After reading the documentation, it is not clear to me

            1. whether either of them uses the other
            2. whether both can be used interchangeably when introducing to a model an input layer (let's say with dimensions (64, 64))
            ...

            ANSWER

            Answered 2022-Mar-03 at 11:06

            I think the confusion comes from using a tf.keras.Sequential model, which does not need an explicit Input layer. Consider the following two models, which are equivalent:

            Source https://stackoverflow.com/questions/71335830

            QUESTION

            AttributeError: 'Tensor' object has no attribute 'is_initialized'
            Asked 2022-Feb-24 at 02:41

            I got this error when I try to fit the model. I tried to use a single GPU version but it remains. If I upgrade to TensorFlow 2 it will be solved but I need to keep it that in this version of TensorFlow.

            This is the code for the model that I have used. This model consists of different layers.

            ...

            ANSWER

            Answered 2022-Feb-24 at 02:41

            This is likely an incompatibility between your version of TF and Keras. Daniel Möller got you on the right path but tf.keras is a TF2 thing, and you are using TF1, so your solution will be different.

            What you need to do is install a version of Keras that is compatible with TF 1.14. According to pypi, TF 1.14 was released June 18, 2019.

            https://pypi.org/project/tensorflow/#history

            You should do a grid search of the Keras versions just before and after that date.

            https://pypi.org/project/keras/#history

            I'd go with these Keras versions.

            2.2.4 2.2.5 2.3.1 2.4.1

            Install these versions using for example

            Source https://stackoverflow.com/questions/71159722

            QUESTION

            Tensorflow importing custom layers, runs training of custom model
            Asked 2022-Feb-23 at 12:19

            My use case is the following: I am creating a dimensionality reducing AutoEncoder with Tensorflow. I have implemented three custom layers and with that a model

            ...

            ANSWER

            Answered 2022-Feb-23 at 12:14

            Do you have Tensorflow 1 or 2? I think it has to do with running in eager_mode. By default, it will build a graph and therefore run it twice upon startup.

            Source https://stackoverflow.com/questions/71236651

            QUESTION

            Need help in LSTM Autoencoder - Anomaly detection
            Asked 2021-Dec-22 at 08:40

            I am trying to do Anomaly detection with LSTM. I am able to plot all features with local and global anomaly but I am not able to print all anomaly values, datetime, loss, threshold and date together (like a table).

            After calculating test and train MAE in the following way:

            ...

            ANSWER

            Answered 2021-Dec-22 at 08:40

            The error is due to the fact that this step

            Source https://stackoverflow.com/questions/70434045

            QUESTION

            Is it possible to use image_dataset_from_directory() with convolutional autoencoders in Keras?
            Asked 2021-Dec-08 at 09:17

            There is a similar question here which asks how to use image_dataset_from_directory() with autoencoder. Question is actually unanswered, because answer suggests using something else.

            My question is, is it even possible to use image_dataset_from_directory() as input for convolutional autoencoder in Keras?

            ...

            ANSWER

            Answered 2021-Nov-02 at 15:38

            It is definitely possible, you just have to adjust your inputs to your model beforehand:

            Source https://stackoverflow.com/questions/69812267

            QUESTION

            Custom keras callbacks and changing weight (beta) of regularization term in variational autoencoder loss function
            Asked 2021-Dec-02 at 08:18

            The variational autoencoder loss function is this: Loss = Loss_reconstruction + Beta * Loss_kld. I am trying to efficiently implement Kullback-Liebler Divergence Cyclic Annealing--that is changing the weight of beta dynamically during training. I subclass the tf.keras.callbacks.Callback class as a start, but I don't know how I can update a tf.keras.Model variable from a custom keras callback. Furthermore, I would like to track how the betas change at the end of each training step (on_train_batch_end), and right now I have a list in the callback class, but I know python lists don't play well with TensorFlow. When I fit the model, I get a warning that my on_train_batch_end function is slower than the processing of the batch itself. I think I should use a tf.TensorArray instead of python lists, but then the tf.TensorArray method write cannot use a tf.Variable for the index (i.e., as the number of steps changes, the index in the tf.TensorArray to which a new beta for that step should be written changes)... is there a better way to store value changes? It looks like this github shows a solution that doesn't involve a custom tf.keras.Model and that uses a different kind of KL annealing. Below is a callback function and dummy VAE.

            ...

            ANSWER

            Answered 2021-Oct-23 at 14:01

            Concerning your first question: It depends how you plan to update your gradients with your optimizer (e.g. ADAM). When training a VAE with Tensorflow / Keras, I usually use the @tf.functiondecorator to calculate the loss of my model and based on that update my model's parameters:

            Source https://stackoverflow.com/questions/68636987

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install AutoEncoder

            You can download it from GitHub.
            You can use AutoEncoder like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

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            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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