capstone | Source code to train and validate two text classifier models | Machine Learning library

 by   auriml Python Version: Current License: No License

kandi X-RAY | capstone Summary

kandi X-RAY | capstone Summary

capstone is a Python library typically used in Healthcare, Pharma, Life Sciences, Artificial Intelligence, Machine Learning, Deep Learning, Pytorch applications. capstone has no bugs and it has low support. However capstone has 2 vulnerabilities and it build file is not available. You can download it from GitHub.

Source code to train and validate two text classifier models - based on FastText vs Deep Learning using a 1-D Convolutional Neural Network with pretrained wordembeddings - on the corpus of cancer clinical trial protocols published in clinicaltrial.gov. The models classifies short free-text sentences (describing clinical information like medical history, concomitant medication, type and features of tumor, cancer therapy etc.) as eligible or not eligible criterion to volunteer in clinical trials. Both models are evaluated using cross-validation with k-folds = 5 on incremental sample sizes (1K, 10K, 100K, 1M samples) and on the largest balanced set (using undersampling) with 4.01 M classified samples available (from a total of 6 M samples) . Read original paper: Bustos, A.; Pertusa, A. Learning Eligibility in Cancer Clinical Trials Using Deep Neural Networks. Appl. Sci. 2018, 8, 1206. www.mdpi.com/2076-3417/8/7/1206.
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            kandi-support Support

              capstone has a low active ecosystem.
              It has 10 star(s) with 6 fork(s). There are 2 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 1 open issues and 0 have been closed. On average issues are closed in 736 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of capstone is current.

            kandi-Quality Quality

              capstone has no bugs reported.

            kandi-Security Security

              capstone has 2 vulnerability issues reported (0 critical, 1 high, 1 medium, 0 low).

            kandi-License License

              capstone does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              capstone releases are not available. You will need to build from source code and install.
              capstone has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions are available. Examples and code snippets are not available.

            Top functions reviewed by kandi - BETA

            kandi has reviewed capstone and discovered the below as its top functions. This is intended to give you an instant insight into capstone implemented functionality, and help decide if they suit your requirements.
            • Run classification
            • Generate sequences from a sequence of sequences
            • Return a list of Cancer conditions
            • Write a csv file to a csv file
            • Split a sentence into sentences
            • Return a list of sentences with cancer conditions
            • Convert a serie to 2D array
            • Generate a small subset of text dataset
            • Creates a balanced subsample of a distribution
            • Generate a small set of sentence embeddings
            • Retrieve information from a file
            • Clean text
            • Hyperparameter search
            • Plot a learning curve
            • Generate a 2D tensorflow tensorflow tensor
            • Write text2words to a csv file
            • Build word vector matrix
            • Plots embeddings with given labels
            • Transfers sentences into bigrams
            • Find a list of word clusters
            Get all kandi verified functions for this library.

            capstone Key Features

            No Key Features are available at this moment for capstone.

            capstone Examples and Code Snippets

            No Code Snippets are available at this moment for capstone.

            Community Discussions

            QUESTION

            Word Prediction APP does not show results
            Asked 2021-Jun-14 at 12:17

            I would greatly appreciate any feedback you might offer regarding the issue I am having with my Word Prediction Shiny APP Code for the JHU Capstone Project.

            My UI code runs correctly and displays the APP. (see image and code below)

            Challenge/Issue: My problem is that after entering text into the "Text input" box of the APP, my server.R code does not return the predicted results.

            Prediction Function:

            When I run this line of code in the RConsole -- predict(corpus_train,"case of") -- the following results are returned: 1 "the" "a" "beer"

            When I use this same line of code in my server.r Code, I do not get prediction results.

            Any insight suggestions and help would be greatly appreciated.

            ...

            ANSWER

            Answered 2021-Apr-27 at 06:46

            Eiterh you go for verbatimTextOutput and renderPrint (you will get a preformatted output) OR for textOutput and renderText and textOutput (you will get unformatted text).

            Source https://stackoverflow.com/questions/67268023

            QUESTION

            Rewriting Fetch API in Javascript
            Asked 2021-Jun-10 at 04:51

            I am new to using Javascript APIs and I'm trying to learn more about the different ways to write fetch. This uses the async await and Fetch class. I want to rewrite it without this, to look more like this:

            ...

            ANSWER

            Answered 2021-Jun-10 at 04:51

            This could be as simple as modifying your temperature function to:

            Source https://stackoverflow.com/questions/67914543

            QUESTION

            How do I make one form show up when my link is visited?
            Asked 2021-Jun-08 at 16:11

            I created a register/login page that redirects to a to do list website that I created. However, when you first click on my link, both the login and register forms show up. I only want the sign in form to show up first (if someone needs to register, there is an anchor tag at the bottom of the sign in form that redirects to the register form). What do I need to change in my code to make only the sign in form show up when the link is visited?

            link: https://capstone-project-with-login.herokuapp.com/

            Code:

            ...

            ANSWER

            Answered 2021-May-27 at 07:02

            Try hiding signup form in the main function, then toggle it with event listeners (like below),

            Source https://stackoverflow.com/questions/67717120

            QUESTION

            Does the Captone python module support an exe as input, or does the data need to be an isolated instruction binary?
            Asked 2021-May-25 at 00:24

            Some disassemblers like IDA or Ghidra take an exe and output the instructions. Other disassemblers require the user to parse the PE header, isolate binary for the instructions and pass that in.

            I'm trying to learn to use the Capstone Python API, but the .py documentation only ever shows a buffer of isolated instructions being passed, like so:

            ...

            ANSWER

            Answered 2021-May-25 at 00:24

            Capstone is architecture-independent. It doesn't understand PE files or elf files. You just feed it bytes of machine language for whatever processor you have.

            Source https://stackoverflow.com/questions/67680211

            QUESTION

            Typescript Alert showing multiple times when not needed
            Asked 2021-May-19 at 05:38

            I am trying to get the button to do a single alert when the button is clicked, but the button odes something strange:

            The first time I click the Login Button, the alert shows once, when I click it again the alert shows 2 times, then I click the button a 3rd time, the alert shows 3 times. After that, If I were to click the Forgot Password Button, the alert assigned to Forgot password would show 4 times.

            I am very confused as to why this happens and how to fix it?

            .ts

            ...

            ANSWER

            Answered 2021-May-19 at 05:38

            You are setting up new event listeners in your constructor every time the enter button is clicked. They're compounding on top of each other. Additionally, you're setting the username and password values at the wrong time. They should be set when the user tries to validate their input (clicks the submit button). The constructor should be instantiated after the html and script have loaded, eg. in a window.onload event

            Source https://stackoverflow.com/questions/67594448

            QUESTION

            Not sure where to make external API calls in my Spring MVC application
            Asked 2021-May-18 at 04:06

            First a disclaimer – I am very new to programming. This project is for what's more or less a capstone, and we're working in the Spring Boot framework (Java language, Thymeleaf views).

            The overall gist of my program is this: a user fills out a form, and those parameters are used to make a call to the Yelp Fusion API.

            I spent a lot of time figuring out how to make the API call, and sort of neglected to think about where to do it. It's currently in my Controller class, but now I'm not so sure if that's the best idea – maybe it should go in a Model or even a DTO? I'd appreciate any insight, as the general internet seems to be conflicted.

            Here's the link to the repository on GitHub if that helps.

            Thanks!

            ...

            ANSWER

            Answered 2021-May-18 at 04:06

            It is preferred to make any client calls or write business logic for the API in the Service layer.

            In your case, you can create a service package and create some interface YelpClientCallService.java which is autowired in your controller, and a class YelpClientCallServiceImpl.java that implements the YelpClientCallService.java interface. Now, you can call the client API from this class and then perform business logic on the response received, or you can just return the response to the controller.

            You can also annotate the service class as @Service instead of @Component. It is just a special name for @Component and will help in classification. For more details on package structure in Springboot you can check the below resources.

            1. Spring docs : this has the basic package structure that is followed.
            2. This medium blog is also decent to understand other aspects of project structure and best practices.

            Source https://stackoverflow.com/questions/67578230

            QUESTION

            Django - Is My Static File in the Wrong Place?
            Asked 2021-May-15 at 21:30

            I'm creating a project for a weather app with Django, and I think my Javascript file is in the wrong place. I have it in a static folder. But I'm getting the console error GET http://127.0.0.1:8000/static/capstone/capstone.js net::ERR_ABORTED 404 (Not Found)

            Here is how my project files are set up. Is this correct?

            In settings.py I also have:

            ...

            ANSWER

            Answered 2021-May-15 at 21:20

            Your BASE_DIR by default points to the same directory that manage.py is in. If you haven't changed it then capstone.js is currently located in

            Source https://stackoverflow.com/questions/67551212

            QUESTION

            Get User Input from HTML in TypeScript WITHOUT using React or Angular
            Asked 2021-May-11 at 18:28

            The goal of my current code is to take in the user's input for "se" and "sp" in the .html code and if the input is "billy" and "bronco" respectively it should give the alert("success")

            I am very new to TypeScript, but my .ts is transpiled to .js. Currently only the alert("wrong username or password") runs, no matter what the input is. the code does not use the alert("success") even if the input is correct I was wondering what I am doing wrong, because, for this project, I don't want to use React or Angular. Is it possible to do accomplish what I want without using those?

            this is my .ts code:

            ...

            ANSWER

            Answered 2021-May-11 at 18:01

            You're grabbing the login and password values out of the elements when the page is first loaded, rather than doing it at the time when the user tries to submit. Move that logic into the submit event listener:

            Source https://stackoverflow.com/questions/67492005

            QUESTION

            TypeScript and HTML Buttons without angular or react possible?
            Asked 2021-May-11 at 04:22

            I am very new to Typescript, and want to make a small login page using Typescript. I have already transpiled the .ts code to .js, but the buttons still do not function.

            Sadly there are not any tutorials on this without angular or react for TypeScript, and I am very confused on how to move forward.

            Currently, I have the buttons working as simple as possible: all they are supposed to do right now is call an alert

            I was wondering why that is and where my code is wrong. Everything builds well and there are no errors given when I compile.

            this is my .ts code

            ...

            ANSWER

            Answered 2021-May-11 at 04:22

            I have tried to run your files and you seem to have 3 minor issues.

            1. Null pointer error - There is no element with the id submit. So the document.getElementById("submit") in your code is giving a null which when used to call addEventListener is throwing an error. This can be seen in the chrome console.

            2. In your html code, you have set onClick parameter as register() and forgot(), whereas they should just be register and forgot like this


            3. In your tsconfig, instead of "" it should just be "LoginTs.ts".

            Fixing these 3 points should be enough for you to get it up and running. tsconfig is all correct. no issues with that.

            Source https://stackoverflow.com/questions/67476621

            QUESTION

            HTML and Typescript buttons without React?
            Asked 2021-May-10 at 08:34

            UPDATED CODE (still not working) I have been trying to figure out why my buttons weren't working on the html, and all of the tutorials I see use React or Angular. I was wondering if there is a way for my code to run without it.

            This is the simplest I've gotten it down to and none of the examples I've been following have made it run. Currently it's just a button that gives an alert, and I just need help to figure out how to get that small part to work

            edits: transpiled from .ts to .js, changed the forgotBtn to same as eventListener

            This is my HTML Code:

            ...

            ANSWER

            Answered 2021-May-10 at 07:08

            This is what jQuery did that made it so popular - until the DOM is built your JS won't be able to find anything. You want the hooking up of events to happen after the DOMContentLoaded event.

            You also have a .ts file in your script tag, but you need the transpiled .js file for the browser. Change this to:

            Source https://stackoverflow.com/questions/67440807

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            Capstone 3.0.4 has an out-of-bounds vulnerability (SEGV caused by a read memory access) in X86_insn_reg_intel in arch/X86/X86Mapping.c.
            Integer overflow in the cs_winkernel_malloc function in winkernel_mm.c in Capstone 3.0.4 and earlier allows attackers to cause a denial of service (heap-based buffer overflow in a kernel driver) or possibly have unspecified other impact via a large value.

            Install capstone

            Note: A pregenerated subsample file with 1M samples and 186 MB is available for download in https://www.kaggle.com/auriml/eligibilityforcancerclinicaltrials If the pregenerated subsample dataset is used rename it and save it as './textData/labeledEligibility.csv' and proceed directly to step 2, otherwise, to build a new dataset from scratch proceed to step 0.
            Size of folder "search_result": 1.28 GB.

            Support

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