freesurfer | recon-all from FreeSurfer

 by   bids-apps Python Version: v6.0.1-6.1 License: Apache-2.0

kandi X-RAY | freesurfer Summary

kandi X-RAY | freesurfer Summary

freesurfer is a Python library. freesurfer has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However freesurfer build file is not available. You can download it from GitHub.

This app implements surface reconstruction using Freesurfer. It reconstructs the surface for each subject individually and then creates a study specific template. In case there are multiple sessions the Freesurfer longitudinal pipeline is used (creating subject specific templates) unless instructed to combine data across sessions. The current Freesurfer version is based on: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz. The output of the pipeline consist of the SUBJECTS_DIR created during the analysis.
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            kandi-support Support

              freesurfer has a low active ecosystem.
              It has 35 star(s) with 35 fork(s). There are 7 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 15 open issues and 19 have been closed. On average issues are closed in 114 days. There are 2 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of freesurfer is v6.0.1-6.1

            kandi-Quality Quality

              freesurfer has no bugs reported.

            kandi-Security Security

              freesurfer has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              freesurfer is licensed under the Apache-2.0 License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              freesurfer releases are available to install and integrate.
              freesurfer has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions are not available. Examples and code snippets are available.

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            freesurfer Key Features

            No Key Features are available at this moment for freesurfer.

            freesurfer Examples and Code Snippets

            No Code Snippets are available at this moment for freesurfer.

            Community Discussions

            No Community Discussions are available at this moment for freesurfer.Refer to stack overflow page for discussions.

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install freesurfer

            You can download it from GitHub.
            You can use freesurfer like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            CLONE
          • HTTPS

            https://github.com/bids-apps/freesurfer.git

          • CLI

            gh repo clone bids-apps/freesurfer

          • sshUrl

            git@github.com:bids-apps/freesurfer.git

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