vae | a simple vae and cvae from keras | Machine Learning library
kandi X-RAY | vae Summary
kandi X-RAY | vae Summary
a simple vae and cvae from keras.
Support
Quality
Security
License
Reuse
Top functions reviewed by kandi - BETA
- Generate data from images
- Read an image
- Save loss and weights
- Sample image
vae Key Features
vae Examples and Code Snippets
$ python vae.py -h
usage: vae.py [-h] {train,sample,reconstruct} ...
positional arguments:
{train,sample,reconstruct}
train train VAE model [vae.py train -h]
sample sample from existing model [vae.py sample -h]
$ python vae.py
Variables
---------
encoder/hidden_1/W:0 (784, 500)
encoder/hidden_1/b:0 (500,)
encoder/hidden_2/W:0 (500, 500)
encoder/hidden_2/b:0 (500,)
encoder/mean/W:0 (500, 2)
encoder/mean/b:0 (2,)
encoder/log_var/W:0 (500, 2)
encoder/log_var/
python3 train.py \
--epochs 30 --batch-size 512 --seed 42 \
--model_type fc_conv --dataset_type fmnist --latent_space_size 10 \
--do_augs False \
--lr 1e-3 --m1 40 --m2 50 \
--optimizer adam \
--do_running_mean False --img_loss_weight 1.0 --kl_
import copy
import rdkit.Chem as Chem
import torch
import torch.nn as nn
import torch.nn.functional as F
from dgl import batch, unbatch
from .chemutils import (
attach_mols_nx,
copy_edit_mol,
decode_stereo,
enum_assemble_nx,
se
#!/usr/bin/env python
"""Chainer example: train a VAE on MNIST
"""
from __future__ import print_function
import argparse
import matplotlib
# Disable interactive backend
matplotlib.use('Agg')
import matplotlib.pyplot as plt
import numpy as np
import
# Copyright 2018 The JAX Authors.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# https://www.apache.org/licenses
Community Discussions
Trending Discussions on vae
QUESTION
I copied this example to build a variational autoencoder (VAE). The example uses images, but I use it for a signal that contains negative values. After training, the autoencoder only reconstructs the positive part of the signal, it does not produce negative values. Can anyone spot where the problem is or explain why this is the case?
...ANSWER
Answered 2022-Apr-05 at 12:05If you used the exact code as the one shown in the example you put the link in, then at the end of the decoder you have x = torch.sigmoid(self.decConv2(x))
which take the real number line and outputs numbers between [0, 1]. This is why the network is unable to output negative numbers.
If you want to change the model to output negative numbers as well, remove the sigmoid function.
This means of course that you also have to change the loss function with which you train your model since the BCE loss is only good for outputs in the range of [0, 1].
As a recommendation I would suggest anyone to use the BCE with logits loss and avoid using the sigmoid in the decoder since this method incorporates the sigmoid and the BCE loss in a more numerically stable manner.
QUESTION
import json
a_json = '{"some_body":"
[{"someId":"189353945391","EId":"09358039485","someUID":10,"LegalId":"T743","cDate":"202452","rAmount":{"aPa":{"am":1500,"currId":"UD"},"cost":{"amount":1000,"currId":"US"},"lPrice":{"amount":100,"currId":"DD"}},"tes":{"ant":0,"currId":"US"},"toount":{"amnt":0,"currId":"US"},"toount":{"amt":210,"currId":"US"},"bry":"US","pay":[{"pId":"7111","axt":{"amt":2000,"currId":"US"},"mKey":"CSD"}],"oItems":[{"iIndex":0,"rId":"69823","provId":"001","segEntityId":"C001","per":{"vae":1,"ut":"MOS"},"pct":{"prod":"748"},"revType":"REW","rAmount":{"aPaid":{"amt":90000,"currId":"US"},"xt":{"amt":0,"currId":"USD"},"lPrice":{"amt":90000,"currId":"US"}},"stion":{"sLocal":"094u5304","eLocal":"3459340"},"tx":{"adt":{"adet":0,"currId":"US"},"era":"werTIC"}}}]"}'
...ANSWER
Answered 2022-Apr-02 at 20:14It seems that you're treating the content of some_body
as a string since it's enclosed with double quotes. But inside of that string there's also quotation marks and now it's interpreted that the content of some_body
is [{
and then it breaks because directly after that is someId
rather than a comma. Thus the error:
expecting ',' delimiter: line 1 column 18 (char 17)
If the content of some_body
was actually meant to be a string then all the double quotes inside of it should be preceded by a double backslash (\\
) although in this case you'd have to parse the JSON twice - first the entire a_json
string and then the content of some_body
. However I think it would be easier to just remove the double quotes around the content of some_body
.
QUESTION
I am trying to develop a VAE using this dataset, I have created and encoder and decoder by myself using keras tutorial, I only used Dense layers but now I wanted to add Conv1D layers too, however, after adding 1 conv layer to the encoder I get: Input 0 of layer "conv1d_3" is incompatible with the layer: expected min_ndim=3, found ndim=2. Full shape received: (None, 3)
I have found many questions like this but haven't found the exact answer, I want to add more Conv1D layers to the encoder and decoder, what do I need to change in both of them to add Con1D layers?
The code:
...ANSWER
Answered 2022-Apr-01 at 11:48The problem is that data
is missing the feature dimension necessary for a Conv1D
layer, which needs the input_shape=(timesteps, features)
.
You can try adding an additional dimension with tf.expand_dims
:
QUESTION
I am developing a VAE using this dataset. I have used keras tutorial code and developed my own VAE. However, when I run fit() function I get: Invalid reduction dimension 1 for input with 1 dimensions. for '{{node Sum}} = Sum[T=DT_FLOAT, Tidx=DT_INT32, keep_dims=false](Mean, Sum/reduction_indices)' with input shapes: [?], [2] and with computed input tensors: input[1] = <1 2>. What do I have to change?
The code:
...ANSWER
Answered 2022-Mar-29 at 10:45The error is coming from tf.reduce_mean
and tf.reduce_sum
. In the train_step
method of the VAE
model, change this line:
QUESTION
ANSWER
Answered 2022-Mar-28 at 19:03The encoder
and decoder
functions expect an input_shape
sequence. But with
QUESTION
I am training a VQVAE with this dataset (64x64x3). I have downloaded it locally and loaded it with keras in Jupyter notebook. The problem is that when I ran fit()
to train the model I get this error: ValueError: Layer "vq_vae" expects 1 input(s), but it received 2 input tensors. Inputs received: [, ]
. I have taken most of the code from here and adapted it myself. But for some reason I can't make it work for other datasets. You can ignore most of the code here and check it in the page, help is much appreciated.
The code I have so far:
...ANSWER
Answered 2022-Mar-21 at 06:09This kind of model does not work with labels. Try running:
QUESTION
I'm working on a procfs kernel extension for macOS and trying to implement a feature that emulates Linux’s /proc/cpuinfo similar to what FreeBSD does with its linprocfs. Since I'm trying to learn, and since not every bit of FreeBSD code can simply be copied over to XNU and be expected to work right out of the jar, I'm writing this feature from scratch, with FreeBSD and NetBSD's linux-based procfs features as a reference. Anyways...
Under Linux, $cat /proc/cpuinfo showes me something like this:
...ANSWER
Answered 2022-Mar-18 at 07:54There is no need to allocate memory for this task: pass a pointer to a local array along with its size and use strlcat
properly:
QUESTION
I'm using the CIFAR-10 pre-trained VAE from lightning-bolts. It should be able to regenerate images with the quality shown on this picture taken from the docs (LHS are the real images, RHS are the generated)
However, when I write a simple script that loads the model, the weights, and tests it over the training set, I get a much worse reconstruction (top row are real images, bottom row are the generated ones):
Here is a link to a self-contained colab notebook that reproduces the steps I've followed to produce the pictures.
Am I doing something wrong on my inference process? Could it be that the weights are not as "good" as the docs claim?
Thanks!
...ANSWER
Answered 2022-Feb-01 at 20:11First, the image from the docs you show is for the AE, not the VAE. The results for the VAE look much worse:
https://pl-bolts-weights.s3.us-east-2.amazonaws.com/vae/vae-cifar10/vae_output.png
Second, the docs state "Both input and generated images are normalized versions as the training was done with such images." So when you load the data you should specify normalize=True. When you plot your data, you will need to 'unnormalize' the data as well:
QUESTION
I want to have two 50% divs, but the content of the first div got a min-size.
...ANSWER
Answered 2021-Oct-15 at 13:37You could use CSS Grid on the parent div and set it to two equal columns.
QUESTION
The variational autoencoder loss function is this: Loss = Loss_reconstruction + Beta * Loss_kld. I am trying to efficiently implement Kullback-Liebler Divergence Cyclic Annealing--that is changing the weight of beta dynamically during training. I subclass the tf.keras.callbacks.Callback
class as a start, but I don't know how I can update a tf.keras.Model
variable from a custom keras callback. Furthermore, I would like to track how the betas change at the end of each training step (on_train_batch_end
), and right now I have a list in the callback class, but I know python lists don't play well with TensorFlow. When I fit the model, I get a warning that my on_train_batch_end
function is slower than the processing of the batch itself. I think I should use a tf.TensorArray
instead of python lists, but then the tf.TensorArray
method write
cannot use a tf.Variable
for the index (i.e., as the number of steps changes, the index in the tf.TensorArray
to which a new beta for that step should be written changes)... is there a better way to store value changes? It looks like this github shows a solution that doesn't involve a custom tf.keras.Model
and that uses a different kind of KL annealing. Below is a callback function and dummy VAE.
ANSWER
Answered 2021-Oct-23 at 14:01Concerning your first question: It depends how you plan to update your gradients with your optimizer (e.g. ADAM). When training a VAE with Tensorflow / Keras, I usually use the @tf.function
decorator to calculate the loss of my model and based on that update my model's parameters:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install vae
You can use vae like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
Support
Reuse Trending Solutions
Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items
Find more librariesStay Updated
Subscribe to our newsletter for trending solutions and developer bootcamps
Share this Page