crimson | Bioinformatics tool outputs converter to JSON or YAML | YAML Processing library
kandi X-RAY | crimson Summary
kandi X-RAY | crimson Summary
Bioinformatics tool outputs converter to JSON or YAML
Support
Quality
Security
License
Reuse
Top functions reviewed by kandi - BETA
- Parse input
- Write payload to out_handle
- Get file handle
- Parse fastq output file
- Parse the module contents
- Convert string to int float
- Search text using pattern
- Parse command
- Run fastqc
- Print flagstat output
- Runs Fusioncatcher
- Perform a star fusion
- Convert pct
crimson Key Features
crimson Examples and Code Snippets
Community Discussions
Trending Discussions on crimson
QUESTION
I'm following this great solution to make a slider https://stackoverflow.com/a/70340585/18736427
It uses a good technique where once the slide reaches the first/last slide, it will insert the first/last slide respectively into the first/last place to make a loop effect.
However, this effect is instant...When you click next once it reaches the last slide, the first slide will always immediately be inserted which causes a weird animation sight.
You can run the code snippet to have an idea, the animation looks good before 5, but it will be weird after it.
I've tried the setTimeout method but it looks even weird because it just flies over to the right side every time when you click the next button.
ANSWER
Answered 2022-Apr-14 at 11:53When you move to the next slide you check if you're at the last one and move the first slide back to the right. But because you always show part of the next image you're actually too late at that point: you need to check for the 'one before last' slide. This will give you time to move the next slide into place. Same in the other direction.
You're also doing the same check multiple times (you check if you need to call readyNextSlide, but inside that function you're doing the same check again. So I moved readyNextSlide into the goToSlide function for simplicity.
The below code isn't perfect (for example, it doesn't show slide 6 at the start because it is moved to the back (you should be able to fix that by starting at slide #2) and clicking very quickly will make the slides disappear for a bit (fixable by adding some sort of blocking to clicking until the movement is done, or by using the slide positions instead of just the index in code) but it should help.
See the changes to readyNextSlide which now moves the slides 220% instead of 110%, and is called when you're at the one before last or one before first slide:
QUESTION
Site page in question:
https://reubenanderson.com/nisswa_dock/dock-builder/
I have a project where a user can drag a section of a dock to a lake shore to create their own dock. This is inside of a wordpress page and I am having trouble with moving the dock section after it is dropped. When I drag the section it jumps to a different position and I cannot figure out why. When I add draggable to the section after it is appended, do I need to add the position information there as well? If so how? Could this be a conflict coming from Wordpress? I appreciate the help.
The jumping (moving position) problem in the snippet is not as bad as in the WordPress page.
EDIT: I am aware it's a heinous design. I am using garish colors so I can see the results of DIV padding, spacing etc. I am going for functionality then beauty.
...ANSWER
Answered 2022-Mar-16 at 17:37Consider the following example.
QUESTION
I am trying to make it so when I open the page, test will show up as red and the testing will show up as white. There is a delay that I am using for when the page opens that I want to keep (if you run the program you will see).
Css
...ANSWER
Answered 2022-Feb-11 at 22:34Do you mean like this? See changes under /* added CSS */
QUESTION
How could I add a vertical line marker to this chart at a specific date? Week end is the date column.
ANSWER
Answered 2022-Mar-10 at 05:30First make sure the date column Week end has been converted to_datetime.
QUESTION
Here is the data I used for the fit which does not work:
...ANSWER
Answered 2022-Feb-24 at 15:38You have the arguments to np.trapz reversed. It should be
QUESTION
ANSWER
Answered 2022-Feb-23 at 21:14When it wraps onto a new line I want to align this new line with the 2nd item on the first row of the flexbox.
So, the real question is: How to re-arrange flex items when wrapping occurs?
Since HTML and CSS, by themselves, have no concept of when elements wrap, they have no control of this situation. You have to handle it, either with media queries or JavaScript.
Once you've selected your method for detecting the wrap, you can use the order property to re-arrange the items.
QUESTION
I have a web socket that receives data from a web socket server every 100 to 200ms, ( I have tried both with a shared web worker as well as all in the main.js file),
When new JSON data arrives my main.js runs filter_json_run_all(json_data) which updates Tabulator.js & Dygraph.js Tables & Graphs with some custom color coding based on if values are increasing or decreasing
1) web socket json data ( every 100ms or less) -> 2) run function filter_json_run_all(json_data) (takes 150 to 200ms) -> 3) repeat 1 & 2 forever
Quickly the timestamp of the incoming json data gets delayed versus the actual time (json_time 15:30:12 vs actual time: 15:31:30) since the filter_json_run_all is causing a backlog in operations.
So it causes users on different PC's to have websocket sync issues, based on when they opened or refreshed the website.
This is only caused by the long filter_json_run_all() function, otherwise if all I did was console.log(json_data) they would be perfectly in sync.
Please I would be very very grateful if anyone has any ideas how I can prevent this sort of blocking / backlog of incoming JSON websocket data caused by a slow running javascript function :)
I tried using a shared web worker which works but it doesn't get around the delay in main.js blocked by filter_json_run_all(), I dont thing I can put filter_json_run_all() since all the graph & table objects are defined in main & also I have callbacks for when I click on a table to update a value manually (Bi directional web socket)
If you have any ideas or tips at all I will be very grateful :)
worker.js:
...ANSWER
Answered 2022-Feb-23 at 00:03I'm reticent to take a stab at answering this for real without knowing what's going on in color_table. My hunch, based on the behavior you're describing is that filter_json_run_all is being forced to wait on a congested DOM manipulation/render pipeline as HTML is being updated to achieve the color-coding for your updated table elements.
I see you're already taking some measures to prevent some of these DOM manipulations from blocking this function's execution (via setTimeout). If color_table isn't already employing a similar strategy, that'd be the first thing I'd focus on refactoring to unclog things here.
It might also be worth throwing these DOM updates for processed events into a simple queue, so that if slow browser behavior creates a rendering backlog, the function actually responsible for invoking pending DOM manipulations can elect to skip outdated render operations to keep the UI acceptably snappy.
Edit: a basic queueing system might involve the following components:
- The queue, itself (this can be a simple array, it just needs to be accessible to both of the components below).
- A queue appender, which runs during
filter_json_run_all, simply adding objects to the end of the queue representing each DOM manipulation job you plan to complete usingcolor_tableor one of your setTimeout` callbacks. These objects should contain the operation to performed (i.e: the function definition, uninvoked), and the parameters for that operation (i.e: the arguments you're passing into each function). - A queue runner, which runs on its own interval, and invokes pending DOM manipulation tasks from the front of the queue, removing them as it goes. Since this operation has access to all of the objects in the queue, it can also take steps to optimize/combine similar operations to minimize the amount of repainting it's asking the browser to do before subsequent code can be executed. For example, if you've got several
color_tableoperations that coloring the same cell multiple times, you can simply perform this operation once with the data from the lastcolor_tableitem in the queue involving that cell. Additionally, you can further optimize your interaction with the DOM by invoking the aggregated DOM manipulation operations, themselves, inside a requestAnimationFrame callback, which will ensure that scheduled reflows/repaints happen only when the browser is ready, and is preferable from a performance perspective to DOM manipulation queueing viasetTimeout/setInterval.
QUESTION
I have 3 modal buttons. All three buttons have different inputs. But when I press the first button, everything is showing completely fine but when I press the 2nd and 3rd button, it shows the same results as the first button. Please have a look, I am attaching my code below.
Extra: It would be very helpful for me if you can suggest me, how I can put multiple photos stacked in the modal body without losing the shape of the modal. It will show a single photo in the modal body but if someone swap over the picture then the next picture will arrive. Thank you so much.
...ANSWER
Answered 2022-Feb-19 at 19:42This would solve the problem where every button triggering the same modal. You should be getting all modals and all buttons.
QUESTION
I am not a coder by trade, but am working on hacking together an image carousel for our website. I've gotten everything to work except for this last weird problem I am having with spacing. In the attached image, you'll see there is too much spacing between the screenshot and the next-image button to the right of it.
Here is the code (apologies in advance, it is truly terrible):
...ANSWER
Answered 2022-Feb-01 at 19:44Replacing justify-content: space-between with justify-content: center in #p-10-s-i-s-image-container will fix that.
QUESTION
Would someone please explain to me why this issue is happening? I have an array of objects that are mapped, and fade in when added to the array.
If inside the map, I return the actual jsx code for the object, then when the object is removed from the array it animates the remaining cards like it should.
...ANSWER
Answered 2022-Jan-31 at 17:39When you return a list of elements like that, each one needs to have a unique key prop. That way when the list changes, React can identify which elements changed. (You could potentially have multiple elements with the same data.)
In fact, if you look in the console of your second example there's an error telling you precisely that:
Warning: Each child in a list should have a unique "key" prop.
To fix it, add a unique key prop to the elements, like you have in your first example.
I'm not sure if your npa or npx values are guaranteed to be unique. If not, you can add an id field to the data.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install crimson
You can use crimson like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
Support
Reuse Trending Solutions
Find, review, and download reusable Libraries, Code Snippets, Cloud APIs from over 650 million Knowledge Items
Find more librariesStay Updated
Subscribe to our newsletter for trending solutions and developer bootcamps
Share this Page
