pydotplus | improved version of the old pydot project

I got the conda working by modifying the script as below, emr python versions were colliding with the conda version.:

Looks like this is part of an actively tracked issue with Tkinter in PyCharm. You can find the reference on the Pycharm's developer's issue tracker. The issue is undiagnosed, but if looking at similar problems with Tk on StackOverflow, one can see that it's an issue with thread safety and/or multithreading.

All I can do is speculate as to the cause, which is not helpful, however, I can at least collate the suggested workarounds:

1. Switch to a different Matplotlib backend (See docs: What is a backend?). Such as Qt5, but you will need to make sure they are available in your environment.

   This approach is the most promising as other backends are better able to deal with not being the main thread or are explicitly safe for multi-threading. It's also the simplest unless you have a really specific reason for preferring TkAgg.

2. Do not use the debugger with interactive plots.

3. Set "Variables Loading Policy" to "Synchronously" in Debugger as suggested by a PyCharm dev in the linked issue.

4. Enable "Scientific mode" in Pycharm.

5. More esoteric workarounds such as closing your figures within the code before drawing the second one. Example, after plotting the first figure:

Try to use some other version of ipython.

Replace the python version in your requirements.txt with:

ipython==7.24.1

However, it doesn't have anything to do with docker configuration i.e. --network=host

geopandas 0.10.1

• have noted that your data is on kaggle, so start by sourcing it
• there really is only one issue shapely.geometry.MultiPoint() constructor does not work with a filtered series. Pass it a numpy array instead and it works.
• full code below, have randomly selected a point to serve as gpdPoint

• If you are using Linux try this in cmd: sudo apt-get install graphviz
• If using macOS, try this brew install graphviz
• i) If on windows install it by conda conda install graphviz and add path env variables C:\Users\username\Anaconda3\Library\bin\graphviz
• ii) Try to install it via conda install python-graphviz

in pydotplus the graph_from_dot_data is in the pydotplus.graphviz package.

use

pydotplus.graphviz.graph_from_dot_data(...)

Ok, I found the problem. As I mentioned in my post, the so-called problem arises based on the versions of the libraries. And it seems, Keras now displays the batch number instead of sample count. Here are the similar posts:

Stackoverflow Post 1

Stackoverflow Post 2

I've got some experience with rasterio, but I am not nearly a master with it. If I remember correctly, rasterio requires you to have installed the program GDAL(both binaries and python utilities), and some other dependencies listed on the PyPi page. I don't use conda at the moment, I like to use the regular python 3.8 installer with pip. Given what I'm seeing with your installation, I would uninstall rasterio and follow a different installation procedure.

I follow the instructions listed here: https://rasterio.readthedocs.io/en/latest/installation.html
This page also has separate instructions for those using Anaconda.

The GDAL installation is by far the most annoying but once it's done, the hard part is over. The python utilities for both rasterio and gdal can be found here:
https://www.lfd.uci.edu/~gohlke/pythonlibs/#gdal
The second link is also provided on the PyPi page but I like to keep it bookmarked because there's a lot of good resources there!

Have you tried importing the specific method you need from pydotplus instead?

Like: from pydotplus import graph_from_dot_data since you're only using that one method from the module.