heimdall | Python based viewer for large mulit-dimensional datasets | Data Visualization library
kandi X-RAY | heimdall Summary
kandi X-RAY | heimdall Summary
Python based viewer for large multi-dimensional datasets. Based on napari and inspired by BigDataViewer. Can display datasets in memory or stored in hdf5, bdv-format, zarr, n5 or knossos file format. This is work in progress.
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Top functions reviewed by kandi - BETA
- View a container
- Load sources from a file
- Infer pyramid format
- Creates a Viewer with keybinding
- Convert data to a source
- Add a source to the viewer
- Add source to viewer
- Check if the given node is a pyramid dataset
- Determine if keys are bv
- Checks if the given keys are imacs
- Check if the given scales are consecutive
- Check the shape of the source
- Example example from roi
- Example 2D example
- View the sources
- Example example
- Returns a list of pyramid levels
- Wraps the source
- Gets the level for a given level
heimdall Key Features
heimdall Examples and Code Snippets
Community Discussions
Trending Discussions on heimdall
QUESTION
I have a generic class Result
that looks like this
ANSWER
Answered 2021-Mar-16 at 14:24You can invoke the correct constructor with:
QUESTION
I have a traefik environment running in docker. Originally I was running services in standard containers. I am not deploying containers to docker swarm and I have done this for traefik too, where the container is only deployed to my swarm manager.
For some reason, traefik successfully registers the host name I have given it, and can access that fine. However, when I deploy any other service to the swarm, traefik doesn't pick it up. There is one other service that has partially worked. I have deployed heimdall to docker swarm which can be access from gateway.docker.swarm:8091 but I don't want the port either.
My traefik compose file is as follows:
...ANSWER
Answered 2021-Jan-12 at 13:50I have figured out the problem.
In my compose file, I was using "traefik.http.services.heimdall.loadbalancer.entrypoints=http" as well as "traefik.http.routers.heimdall.entrypoints=http"
this was incorrect and needed to just be "traefik.http.routers.heimdall.entrypoints=http"
For heimdall, I was also targetting the external port of 8091, whereas I actually needed to target the internal port of 80
QUESTION
I have an environment running docker containers. This environment hosts Traefik, Nextcloud, MotionEye and Heimdall. I also have another environment running CoreDNS in a docker container. For some reason, I can get MotionEye to be accessible from motioneye.docker.swarm (changed the domain in here for privacy). However, for nextcloud and Heimdall, I have to explicitly access the ports and I'm struggling to tell why. e.g. Heimdall is gateway.docker.swarm:8091 when should be gateway.docker.swarm
When a user requests a webpage onto the local dns server X.X.X.117 it gets routed through to the traefik instance on X.X.X.106.
My traefik compose file is as follows:
...ANSWER
Answered 2021-Jan-02 at 21:15When you access through gateway.docker.swarm:8091
it works because you are accessing the heimdall container directly. This is possible because you defined
QUESTION
I have traefik (v. 2.3.5) and other services running on my raspberrypi in my home network. Each service is running on a different port on the same machine. I want traefik to redirect a call from a subpath to a different url. Like so:
http://myServer/omv --> http://myServer:8000
http://myServer/heimdall --> http://myServer:8003
However I can not make it work. My router is not offering a domain/subdomains so I have to live with subpathes instead.
OMV is installed locally so I have created a file provider and that is the only one that is working. I cannot find out what I'm doing wrong with my docker-compose files for e.g. heimdall.
Here is the traefik docker-compose.yml:
...ANSWER
Answered 2020-Dec-15 at 09:07can you check "Host" at "traefik.http.routers.heimdall.rule"
maybe it needs to be like this,
QUESTION
I can create grouped lists in SwiftUI using the following code:
...ANSWER
Answered 2020-Sep-04 at 19:00You just need a way to identify what goes in each section.
This particular way is quite inefficient because it runs through each item in the runesArray
for each section but you can visualize what is going on and then work on your data.
QUESTION
action-types.js
...ANSWER
Answered 2020-Apr-29 at 11:14Kinda fixed by importing the store in the .jsx file , and using
QUESTION
So I have this sidebar component where I load my store and my dispatcher
...ANSWER
Answered 2020-Apr-24 at 08:39if(action.type === RENDER_LAYOUT_ELEMENT){
return { ...state, renderedEl: { ...state.renderedEl, ...action.payload } };
}
QUESTION
Im using react like this
Firstly I load the store with mapStateToProps. And inside that function im actually able to read the store. The object that is read there is basically the same as the this.state.renderedEl
, but with different values.
My goal is to delete that state, and use the store values instead.
Those values should be read in the render() where Im actually using the this.state.renderedEl
values to evaluate some conditions. But I dont undestand how to read the store values instead
ANSWER
Answered 2020-Apr-24 at 06:55I did this
QUESTION
First of all, ive read this question React-redux connect() cannot wrap component defined as a class extending React.Component But im still unable to uderstand it since the connect is being done in some kind of upper level, but I dont understand that phase.
This is my current structure:
reduxStore.js
...ANSWER
Answered 2020-Apr-23 at 11:26do only export class SideBar [...]
for testing purposes, but export default connect(mapStateToProps)(SideBar)
which connects your component to redux
state and assigns reduced state to props.
Edit: The documentation you're looking for is here.
QUESTION
I have a java project which uses sbt(scala) for build. Up until yesterday this was working, but today I am seeing an issue in pulling a repo from maven
...ANSWER
Answered 2020-Feb-05 at 16:10Check the links in sbt configruation file: ~/.sbt/repositories
Change the line maven-central: http://repo1.maven.org/maven2/
to maven-central: https://repo1.maven.org/maven2/
It fixes the downloading without sbt update
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
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Install heimdall
You can use heimdall like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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