lymph | framework for Python services

by deliveryhero Python Version: 0.15.0 License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | lymph Summary

lymph is a Python library. lymph has no bugs, it has no vulnerabilities, it has build file available and it has low support. However lymph has a Non-SPDX License. You can install using 'pip install lymph' or download it from GitHub, PyPI.

framework for Python services

Support

Quality

Security

License

Reuse

Support

lymph has a low active ecosystem.

It has 78 star(s) with 43 fork(s). There are 12 watchers for this library.

It had no major release in the last 12 months.

There are 3 open issues and 4 have been closed. On average issues are closed in 67 days. There are 5 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of lymph is 0.15.0

Quality

lymph has 0 bugs and 0 code smells.

Security

lymph has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

lymph code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

lymph has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

lymph releases are available to install and integrate.

Deployable package is available in PyPI.

Build file is available. You can build the component from source.

lymph saves you 2860 person hours of effort in developing the same functionality from scratch.

It has 6183 lines of code, 852 functions and 121 files.

It has low code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed lymph and discovered the below as its top functions. This is intended to give you an instant insight into lymph implemented functionality, and help decide if they suit your requirements.

Setup configuration
Replace all dollar variables in obj
Load values from file
Iterate over all keys
Handle a request
Send a reply message
Send a Nack command
Setup logging
Bind an address to a zmq socket
Run the command
Start the worker
Loop over the consumer
Show RPC interface details
Create a new instance from a configuration dictionary
Create a new consumer
Patch all
Start monitoring processes
Decorator to handle request errors
Print the available commands
Dispatch the request
Start the container
Register a new instance
Run the service
Initialize the WebService instance
Run the service discovery
The main entry point

Get all kandi verified functions for this library.

lymph Key Features

No Key Features are available at this moment for lymph.

lymph Examples and Code Snippets

No Code Snippets are available at this moment for lymph.

Community Discussions

Trending Discussions on lymph

Point pattern classification with spatstat: what am I doing wrong?

Hover effect happens on all articles, instead of just the one I'm hovering

R Multiple Lines on a Chart

String Contains and String Does Not Contain in Same Command

General question about prop.table function in R

Return JSON Data from PHP and Ajax

How to put each data frame to each corresponding sub-list in a list

How to alternate between plain and solid text font within same label text

How to utilize \n or similar in paste0() for axis-labels

ggplot: How to apply geom_area() or similar to fill area under three distinct geom_line() without overlapping each indepedent fill?

QUESTION

Point pattern classification with spatstat: what am I doing wrong?

Asked 2021-Apr-29 at 21:40

I’am trying to classify bivariate point patterns into groups using spatstat. The patterns are derived from the whole slide images of lymph nodes with cancer. I’ve trained a neural network to recognize cells of three types (cancer “LP”, immune cells “bcell” and all other cells). I do not wish to analyse all other cells but use them to construct a polygonal window in the shape of the lymph node. Thus, the patterns to be analysed are immune cells and cancer cells in polygonal windows. Each pattern can have several 10k cancer cells and up to 2mio immune cells. The patterns are of the type “Small World Model” as there is no possibility of points laying outside the window.

My classification should be based on the position of the cancer cells in relation to the immune cells. E.g. most cancer cells are laying on the “islands” of immune cells but in some cases cancer cells are (seemingly) uniformly dispersed and there are only a few immune cells. In addition, the patterns are not always uniform across the node. As I’m rather new to spatial statistics I developed a simple and crude method to classify the patterns. Here in short:

I calculated a kernel density of the immune cells with sigma=80 because this looked “nice” for me. Den<-density(split(cells)$"bcell",sigma=80,window= cells$window) (Should I have used e.g. sigma=bw.scott instead?)
Then I created a tessellation image by dividing density range in 3 parts (here again, I experimented with the breaks to get some “good looking results”).

...

ANSWER

Answered 2021-Apr-29 at 09:21

It seems you are trying to quantify the way in which the cancer cells are positioned relative to the immune cells. You could do this by something like

Source https://stackoverflow.com/questions/67298342

QUESTION

Hover effect happens on all articles, instead of just the one I'm hovering

Asked 2021-Feb-13 at 03:05

I'm working on my little portfolio page and wanted to put some background/fun stuff on my About page. Right now, it displays the information on ALL 4 article-columns at once, instead of just the one I'm hovering on.

Here's the code and logic I have.

...

ANSWER

Answered 2021-Feb-12 at 20:55

It looks like it is because all the sections are depending on the same state. Thus, once that state changes, all the sections are being affected. How I would approach this would be to have state hold the current hovered section. E.g.

Source https://stackoverflow.com/questions/66178794

QUESTION

R Multiple Lines on a Chart

Asked 2020-Oct-13 at 14:39

I am trying to place 3 columns onto a line chart. But while I can create the chart the lines are not being drawn correctly.

Below are some data and the two different ways I've tried to create the charts.

any help is great;y appreciated.

Data:

...

ANSWER

Answered 2020-Oct-13 at 14:31

Following the comments of our valious colleages, it is bizarre what you want. If you want one line per column the strategy you followed in the first plot might be right. Maybe you want to see each line in a legend, so an approach reshaping data with tidyverse would work. Here the code:

Source https://stackoverflow.com/questions/64336498

QUESTION

String Contains and String Does Not Contain in Same Command

Asked 2020-Aug-18 at 15:17

I have a dataset that looks like this. There are thousands of variations of the symptom column.

...

ANSWER

Answered 2020-Aug-18 at 15:17

SyntaxError: unexpected EOF while parsing

This is a syntax error, meaning it's not even attempting to execute your code yet. EOF means End Of File. So it's reached the end of the file, but it was expecting to see some other syntax. In this case a closing parenthesis:

Source https://stackoverflow.com/questions/63471524

QUESTION

General question about prop.table function in R

Asked 2020-Jul-25 at 21:28

I am using the following sample code to get distribution of patients with different lymph node (N stage) status in a given clinical dataset

...

ANSWER

Answered 2020-Jul-25 at 21:28

No, there's no way to edit the prop.table function to give you your desired result. If you want the sum of your percentages to equal %100, then take a subset of the Cohort "A" first and then tabulate.

Source https://stackoverflow.com/questions/63086807

QUESTION

Return JSON Data from PHP and Ajax

Asked 2020-Jul-22 at 07:05

In my web application just I trying to returning JSON data from MySQL database using PHP and AJAX query. This is where I follow a tutorial on internet. In case in my application it shows and error like;

data = "↵↵↵
↵Notice: Undefined index: lymph in C:\xampp\htdocs\Hospital\hospitalwebsite\test_query\fetch_count.php on line 29

Here is my AJAX Code :-

...

ANSWER

Answered 2020-Jul-22 at 06:21

JQuery work file if the result be json:

Source https://stackoverflow.com/questions/63027749

QUESTION

How to put each data frame to each corresponding sub-list in a list

Asked 2020-Jul-01 at 05:19

I'm building a R function to perform Spearman's rank correlation analysis of the clinical traits of interest with individual genes of interest across all the patients. I successfully created a function, which is called 'computeC', to do this task. You can try here:

the dummy data:

a, clinical data

...

ANSWER

Answered 2020-Jul-01 at 05:19

the function returns an empty dataframe with some warnings for me for the data you have shared but perhaps, you can use lapply :

Source https://stackoverflow.com/questions/62669250

QUESTION

How to alternate between plain and solid text font within same label text

Asked 2020-Jun-08 at 07:31

Question: is it possible to have both plain and solid text font within the same label text specified in scale_fill_manual and scale_color_manual?

I have

Written with

...

ANSWER

Answered 2020-Jun-08 at 07:31

You can use ggtext for markdown style text in ggplot2, see the answer here. You need to add legend.text = ggtext::element_markdown() to your theme and then can use **text** for bold:

Source https://stackoverflow.com/questions/62244960

QUESTION

How to utilize \n or similar in paste0() for axis-labels

Asked 2020-Jun-07 at 09:22

Question: how to utilize n\ or similar to create two text-lines in x-axis label written with paste0

I have

As you can see, I currently have two independent lines on the x-axis as currently written with labels = paste0("LN: \nLND: ", paste0(seq(0,80,5)))).

I would like the numerical value yielded from seq(0,80,5) to appear in both lines, but with % written behind one the of texts.

Expected output:

Bonus question: is it possible to manually right/left/center align the two text lines I am trying to create on x-axis label?

Written with

...

ANSWER

Answered 2020-Jun-07 at 08:25

This is a hack but i seems to do what you want (?). Unfortunately, it doesn't look good with all that text crammed inn there i my opinion.

Source https://stackoverflow.com/questions/62242453

QUESTION

ggplot: How to apply geom_area() or similar to fill area under three distinct geom_line() without overlapping each indepedent fill?

Asked 2020-Jun-06 at 16:05

I have a plot based on my data nd with three geom_line() that demonstrates the probability of death after 1-yr: nd$y_et, 3-yrs: nd$y_tre and 5-yrs: nd$y_fem, respectively, as function of number of resected lymph nodes nd$n_fjernet.

Question: how can I fill each area below the three individual geom_line() of nd$y_et, y_tre, y_fem, without the fill overlapping the subsequent geom_line + fill?

I tried geom_area and geom_polygon but did not come even close to a proper solution.

Current plot

With

...

ANSWER

Answered 2020-Jun-06 at 15:07

nd %>% 
  pivot_longer(values_to="N", names_to="Variable", cols=c(y_fem:y_et)) %>% 
  ggplot(aes(x=n_fjernet, y=N, fill=Variable)) + geom_area()

Source https://stackoverflow.com/questions/62229870

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install lymph

You can install using 'pip install lymph' or download it from GitHub, PyPI.
You can use lymph like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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