screed | simple read-only sequence database

 by   dib-lab Python Version: 1.1.3 License: No License

kandi X-RAY | screed Summary

kandi X-RAY | screed Summary

screed is a Python library. screed has no bugs, it has no vulnerabilities, it has build file available and it has low support. You can install using 'pip install screed' or download it from GitHub, PyPI.

The official repository for screed is:. See for docs. Issues are tracked at
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    Quality
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            kandi-support Support

              screed has a low active ecosystem.
              It has 56 star(s) with 32 fork(s). There are 25 watchers for this library.
              There were 1 major release(s) in the last 6 months.
              There are 9 open issues and 2 have been closed. On average issues are closed in 64 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of screed is 1.1.3

            kandi-Quality Quality

              screed has 0 bugs and 0 code smells.

            kandi-Security Security

              screed has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              screed code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              screed does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              screed releases are available to install and integrate.
              Deployable package is available in PyPI.
              Build file is available. You can build the component from source.
              screed saves you 2294 person hours of effort in developing the same functionality from scratch.
              It has 3407 lines of code, 332 functions and 58 files.
              It has medium code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed screed and discovered the below as its top functions. This is intended to give you an instant insight into screed implemented functionality, and help decide if they suit your requirements.
            • Open a file for reading
            • Returns an iterator over all records
            • Return a list of all items
            • Returns an iterator over the record
            • Iterate over FASTQ file
            • Convert to str
            • Return an iterator over the FASTA file
            • Drops database tables
            • Convert a ScreedDB file to a FASTQ file
            • Wrap a long string
            • Retrieves the comments
            • Generate a quality value
            • Convert a ScreedDB file to a FreedDB file
            • Read HaVA sequences from file
            • Create a sqlite3 database
            • Iterate over hava data
            • Create a screeddb database
            • Reverse the DNA
            • Check if sequence is a DNA sequence
            • Reverse a string
            • Return the complement of a string
            • Read FreedDB sequences from a file
            • Return a list of all keys
            • Returns an iterator over the keys
            Get all kandi verified functions for this library.

            screed Key Features

            No Key Features are available at this moment for screed.

            screed Examples and Code Snippets

            No Code Snippets are available at this moment for screed.

            Community Discussions

            QUESTION

            Filtering two columns of a dataframe with filter
            Asked 2022-Mar-13 at 07:43

            I have a dataframe of the following type:

            ...

            ANSWER

            Answered 2022-Mar-13 at 07:16

            Rather than using filter, I would suggest a more idiomatic way to proceed.

            Suppose you want to filter on the word "Mortar":

            Source https://stackoverflow.com/questions/71442167

            QUESTION

            Retrieve values from deep array PHP
            Asked 2021-Apr-24 at 06:24

            I have a 3 deep array. Currently, the code will isolate a record based on one field ($profcode) and show the heading. Eventually, I am going to build a table showing the information from all the other fields. The code so far is using in_array and a function that accepts $profcode. I am unsure if (and how) I need to use array_keys() to do the next part when I retrieve the "Skills" field. I tried:

            ...

            ANSWER

            Answered 2021-Apr-23 at 21:05

            I picked from your code and ended up with this...The find function is fine as is...just replace this section

            Source https://stackoverflow.com/questions/67195657

            QUESTION

            How to pass store selection in Simple HTML DOM parser
            Asked 2021-Feb-06 at 05:40

            I'm trying to fetch a product name and price on this website Toplivo.bg

            I am using the Simple HTML DOM parser to get it. Here is my code

            ...

            ANSWER

            Answered 2021-Feb-06 at 05:20

            This can be achieved using cURL. Complete code below:

            Source https://stackoverflow.com/questions/66058381

            QUESTION

            Form's field doesn't get initialized
            Asked 2020-Nov-03 at 07:02

            There id a state class with a form

            ...

            ANSWER

            Answered 2020-Nov-03 at 07:02

            This is because the _getEmail() appears to be an async function. You are calling the the _getEmail() function from the initState().

            At this point the UI does not wait for the async process to complete (await), the build() method gets called, and the String _email is still null (not initialised).

            The solution would be to update the TextFormField with the value of email using TextEditingController once the async _getEmail() completes.

            Your code should look like:

            1. Create an object of TextEditingController for the email field:

            Source https://stackoverflow.com/questions/64657672

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install screed

            You can install using 'pip install screed' or download it from GitHub, PyPI.
            You can use screed like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
            Find more information at:

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            Install
          • PyPI

            pip install screed

          • CLONE
          • HTTPS

            https://github.com/dib-lab/screed.git

          • CLI

            gh repo clone dib-lab/screed

          • sshUrl

            git@github.com:dib-lab/screed.git

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