cnvkit-dnanexus | DNAnexus app for CNVkit
kandi X-RAY | cnvkit-dnanexus Summary
kandi X-RAY | cnvkit-dnanexus Summary
cnvkit-dnanexus is a Python library. cnvkit-dnanexus has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However cnvkit-dnanexus build file is not available. You can download it from GitHub.
DNAnexus app for CNVkit
DNAnexus app for CNVkit
Support
Quality
Security
License
Reuse
Support
cnvkit-dnanexus has a low active ecosystem.
It has 2 star(s) with 3 fork(s). There are 2 watchers for this library.
It had no major release in the last 6 months.
There are 9 open issues and 7 have been closed. On average issues are closed in 112 days. There are 1 open pull requests and 0 closed requests.
It has a neutral sentiment in the developer community.
The latest version of cnvkit-dnanexus is current.
Quality
cnvkit-dnanexus has no bugs reported.
Security
cnvkit-dnanexus has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
License
cnvkit-dnanexus is licensed under the MIT License. This license is Permissive.
Permissive licenses have the least restrictions, and you can use them in most projects.
Reuse
cnvkit-dnanexus releases are not available. You will need to build from source code and install.
cnvkit-dnanexus has no build file. You will be need to create the build yourself to build the component from source.
Top functions reviewed by kandi - BETA
kandi has reviewed cnvkit-dnanexus and discovered the below as its top functions. This is intended to give you an instant insight into cnvkit-dnanexus implemented functionality, and help decide if they suit your requirements.
- Creates a BED file based on input bams .
- Run CNVkit .
- Run a CNVkit sample .
- Clone an Asset record .
- Clone an asset into the given region .
- Download CNVkit output files .
- Parse command line arguments .
- Validates that the number of samples match the number of expected values .
- Find the asset project for the given region .
- Run coverage .
Get all kandi verified functions for this library.
cnvkit-dnanexus Key Features
No Key Features are available at this moment for cnvkit-dnanexus.
cnvkit-dnanexus Examples and Code Snippets
No Code Snippets are available at this moment for cnvkit-dnanexus.
Community Discussions
No Community Discussions are available at this moment for cnvkit-dnanexus.Refer to stack overflow page for discussions.
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
Vulnerabilities
No vulnerabilities reported
Install cnvkit-dnanexus
You can download it from GitHub.
You can use cnvkit-dnanexus like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
You can use cnvkit-dnanexus like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
Support
For any new features, suggestions and bugs create an issue on GitHub.
If you have any questions check and ask questions on community page Stack Overflow .
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