prescient | Potential eneRgy undErlying Single Cell gradIENTs | Time Series Database library

 by   gifford-lab Python Version: 0.1.0 License: MIT

kandi X-RAY | prescient Summary

kandi X-RAY | prescient Summary

prescient is a Python library typically used in Database, Time Series Database, Deep Learning applications. prescient has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can install using 'pip install prescient' or download it from GitHub, PyPI.

Software for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs), a generative model for modeling single-cell time-series.
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              prescient has a low active ecosystem.
              It has 14 star(s) with 0 fork(s). There are 13 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 0 open issues and 1 have been closed. On average issues are closed in 6 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of prescient is 0.1.0

            kandi-Quality Quality

              prescient has no bugs reported.

            kandi-Security Security

              prescient has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              prescient is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              prescient releases are available to install and integrate.
              Deployable package is available in PyPI.
              Build file is available. You can build the component from source.

            Top functions reviewed by kandi - BETA

            kandi has reviewed prescient and discovered the below as its top functions. This is intended to give you an instant insight into prescient implemented functionality, and help decide if they suit your requirements.
            • Run the model
            • Fit a regularizer for a regularizer
            • Generate a random sample of p
            • Calculate the drift gradient
            • Implementation of the drift function
            • Proximal operator
            • Calculate weight
            • Calculate growth weights for growth
            • Compute the growth function
            • Evaluate the interpolation model
            • Load data
            • Evaluate the FATE
            • Evaluate interpolate model
            • Evaluate the fit
            • Simulate a model
            • Read the expression data
            • Train the model
            • Interpolate training data
            • Evaluate interpolate data
            Get all kandi verified functions for this library.

            prescient Key Features

            No Key Features are available at this moment for prescient.

            prescient Examples and Code Snippets

            No Code Snippets are available at this moment for prescient.

            Community Discussions

            QUESTION

            How to display math equation
            Asked 2020-Aug-25 at 10:02

            I have a quiz like this

            The problem is $x^2$. I want to make a math equation. $x^2$ should be x power 2. this is the js code

            ...

            ANSWER

            Answered 2020-Aug-25 at 09:54

            Yes, you have to use HTML tag sup for that:

            x2 will display x2

            Source https://stackoverflow.com/questions/63576243

            QUESTION

            Why this quiz not show the questions?
            Asked 2020-Aug-20 at 03:05

            This quiz should be like this [![enter image description here][1]][1]

            this is work on [codepon.io][2] but not work on Blogger. I have tried in JsFiddle but not working too. This the code

            ...

            ANSWER

            Answered 2020-Aug-20 at 03:05

            It is generating the questions, the problem is that you can't see them. You need to change your CSS. FYI, in future please create a Minimal Reproducible Example - for more complex problems, it's difficult to work with so much irrelevant code.

            See the snippet below if you add a background colour to the question div:

            Source https://stackoverflow.com/questions/63497573

            QUESTION

            Create unique integer id column for result rows of union query
            Asked 2019-Sep-12 at 20:50

            I have a view as below in which I union several tables and I'm thinking it might be a good idea to have a unique row number for each row in the result set. The prescient reason is I have an admin tool which doesn't know I'm using a view rather than an ordinary table, and which expects a unique id to be present, but I'm now speculating it might be worth doing more generally (i.e. it may make sense to do this in certain theoretical terms - discussion on this would be welcome). Wondering how to do this in postgresql.

            ...

            ANSWER

            Answered 2019-Sep-12 at 20:50

            QUESTION

            How do I display a specific number of questions from this JavaScript output?
            Asked 2018-Aug-30 at 21:48

            In the following script, how do I go about displaying a specific number of the 5 questions. For example, I only want to display 3 of the questions.

            Here's the fully functioning Codepen for reference.

            Is there a quick fix for that?

            ...

            ANSWER

            Answered 2018-Aug-30 at 21:48

            You can change the generateQuestions function like so:

            Source https://stackoverflow.com/questions/52105194

            QUESTION

            Erros in pmg regression
            Asked 2018-Jul-10 at 20:04

            I have the following kind of panel dataset.

            ...

            ANSWER

            Answered 2018-Jul-10 at 18:55

            The error message given should be quite obvious: duplicate couples (id-time)

            This means you have rows in your data set that specify the same time period (at least) twice for the same individual (say, an observation for individual 1 in year 2016, 2017, 2018, 2018).

            However, when looking at your data set and how you specify the index for the estimation command (see ?pmg), it seems like you want to have the column id as the individual index and month as the time index. The argument indexto pmg takes the individual index at the first position and the time index at thes second position. Thus, flipping id and time should work:

            fpmg <- pmg(return ~ ex_mkt_ret, fund_panel, index=c("id", "month"))

            Source https://stackoverflow.com/questions/50295281

            QUESTION

            Nuget push to vso not listed
            Asked 2017-Aug-30 at 03:25

            I'm trying to push some historical packages to a nuget feed on visualstudio.com (vsts, vso) using Powershell.

            The command is:

            ...

            ANSWER

            Answered 2017-Aug-30 at 03:25

            It is expected behavior if the pushed package version is older than the one already exist in the feed since VSTS only list the latest version of the package. If you want to check the historical versions, click on the package to open the package overview page and then click on the version, it will list the older packages.

            Source https://stackoverflow.com/questions/45924134

            QUESTION

            How can I force a C++ compiler to warn at possibly unwanted integral promotions?
            Asked 2017-Mar-17 at 08:02

            Today I wanted to write a small function to render integers up to 64bit in binary. There I ran across a problem which is apparently due to silent integer promotion. Below source code shows the problem.

            ...

            ANSWER

            Answered 2017-Mar-17 at 08:02

            First, your pretty_correct() function is in fact incorrect. The reason is that the expression 0x1 << i yields UB when i >= 32: you can only shift signed by not more than the length of the type (source). Probably this is the warning you expect to see.

            There are several ways to fix it. The first one is to add type-qualifier to 1:

            Source https://stackoverflow.com/questions/42846971

            QUESTION

            Have you created models that use "God status" values?
            Asked 2017-Jan-20 at 06:41

            Have you ever modeled a system using "God status" values?

            Here's what I mean by God status:

            God status is a status that is knowable only by someone (e.g., God) outside the system, because that person can see the whole picture and is prescient. Contrast that with the individual components of a system, which have only local knowledge and therefore can produce limited, less accurate status values. I imagine the set of God status values would be obtained by an after-the-fact analysis of the system.

            Let me give a (fictitious) example to illustrate what I mean by "create models using God status values."

            Scenario: You are creating a model of a self-driving car. The model has a GPS component which sends estimated position reports every few milliseconds to a Driving Management System. In addition to sending position estimates, the GPS sends a status value. The status value is based on local information. The set of status values are: OK, lost-signal, internal-error. After analyzing the log files of a bunch of self-driving cars, you discover that occasionally hackers spoof the GPS. So, occasionally the GPS sends position estimates based on spoofed data. The fact that a position estimate was created from spoofed data is unknowable (let's assume) to the GPS. Only God knows that the position estimate was created from spoofed data. You want to design a model of self-driving cars in a way that the cars are impervious to spoofed GPS signals (i.e., the car behaves correctly even in the presence of hackers occasionally spoofing the GPS). So, you model the GPS to output 3 values: position estimate, status, and God status. The Driving Management System makes decisions based on the position estimate and the two status values.

            In your modeling experience, have you ever done this kind of thing (incorporated God status into your model)? Is this a common thing to do? A rare thing to do? Is it beneficial? Is it useless?

            ...

            ANSWER

            Answered 2017-Jan-20 at 06:41

            I wonder if this is the same as modeling an attacker that can create arbitrary values and events. Those events can be labeled as generated by the attacker even though the model of the system behavior does not mention the label (and therefore cannot depend on it). This is a common strategy in security analyses. See for example the work of Eunsuk Kang's PhD thesis:

            Multi-Representational Security Analysis. Eunsuk Kang, Aleksandar Milicevic, and Daniel Jackson. Symposium on the Foundations of Software Engineering (FSE), 2016.

            Source https://stackoverflow.com/questions/41745326

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install prescient

            You can install using 'pip install prescient' or download it from GitHub, PyPI.
            You can use prescient like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            Documentation is available at https://cgs.csail.mit.edu/prescient.
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            Install
          • PyPI

            pip install prescient

          • CLONE
          • HTTPS

            https://github.com/gifford-lab/prescient.git

          • CLI

            gh repo clone gifford-lab/prescient

          • sshUrl

            git@github.com:gifford-lab/prescient.git

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