scitools | Additional scientific computing functionality in Python | Performance Testing library
kandi X-RAY | scitools Summary
kandi X-RAY | scitools Summary
Additional scientific computing functionality in Python - extensions to NumPy/SciPy++
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Top functions reviewed by kandi - BETA
- Test the piecewise constant function
- Plot the spectral regression
- Takes a tube
- Checks that input arguments are correct
- Check if arguments are 2d arrays
- Test the function of the tube
- Play a sound file
- Write an array to a file - like object
- Test for 2D test
- Iterate over all code blocks
- Append a token
- Return an iterator over the tokens
- Return CodeLine objects
- Entry point for the command line interface
- Generate a NumPy array of matches
- Write an array to a file
- Calculates the jenker - V
- Test for test cases
- Play a sound
- Test the integration function
- Plot the integral of the piecewise constant function
- Plot the piecewise constant function
- Plot the integrated heaviside function
- Plot the test indicator function
- Play a fourier Fourier transform
- Play a square Fourier transform
- Play data with noise
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scitools Examples and Code Snippets
Community Discussions
Trending Discussions on scitools
QUESTION
I installed Cartopy in a new conda environment new_env
because I was unable to install it in my base environment.
I'm now trying to import cartopy
in Jupyter Lab and am seeing ModuleNotFoundError: No module named 'cartopy'
.
What could be preventing me from importing this package?
I've confirmed cartopy
shows up when I conda activate new_env
and type conda list
, so it's there.
I've also added the corresponding path export PATH="$/opt/anaconda3/envs/new_env/bin:$PATH"
, so Python should know where to pull packages from.
Any idea how to resolve this? Thanks.
...ANSWER
Answered 2022-Jan-06 at 05:34In Jupyter notebook, python venv is not activated by conda activate
command.
This link https://janakiev.com/blog/jupyter-virtual-envs/ will help you.
QUESTION
I have a cartopy GeoAxesSubplot with some points, and potentially lines or polygons. The projection could be any that is supported by cartopy, including orthographic.
I can plot using different transformations, as explained here:
...ANSWER
Answered 2021-Sep-20 at 09:03Keep in mind that "geographical coordinates" is not that well defined, since you're mixing two projections (Mollweide & PlateCarree) which both use "geographical coordinates". Also be careful with using the exact center, since that might accidentally look correct, even if you use incorrect coordinates.
So you might first need to convert your data to the projection of the map (projection).
Other than that the Matplotlib transformation tutorial you link to provides all the information necessary to do the transforms.
Setting up the inputs:
QUESTION
If you download the data from: https://www.naturalearthdata.com/ then is there an option in cartopy.feature adds to check a local directory first before going to the webserver.
I think under windows there is some caching going on in appdata but could not find documentation to provide a path for this feature to look for the data in a directory. Nor how this would be standardized across OS. This could be applied to the feature request in this cartopy example:
snippets:
...ANSWER
Answered 2021-Sep-03 at 14:34As indicated by swatchai in the comment there is a config class that handles this with fall back to download. https://scitools.org.uk/cartopy/docs/v0.15/cartopy.html
QUESTION
For a project I need to create a visualization that draws a circle around some locations on a map. The visualization used Cartopy v.0.18.0 to render the map. It uses the GoogleTiles
class to fetch and display the tiles in the relevant region, and the add_patch(Patch.Circle(..., transform=ccrs.PlateCarree()))
method to draw the circle.
ANSWER
Answered 2021-Feb-27 at 18:30Thanks @swatchai this was the missing hint, so for those intested the code looks like this right now, and it does work! Hooray!
QUESTION
I create a Stamen terrain map with the country border from NaturalEarth. Now I want to remove all the data (terrain in this case) from outside the country border. How would I do that?
My example with the terrain visible inside and outside of Switzerland:
...ANSWER
Answered 2020-Nov-21 at 10:33You need a mask to hide the un-wanted part of the image. Here is a runnable code that demonstrates all the steps to get the intended plot.
QUESTION
I have a task to analyze weather forecast data in Quicksight. The forecast data is held in NetCDF binary files in a public S3 bucket. The question is: how do you expose the contents of these binary files to Quicksight or even Athena?
There are python libraries that will decode the data from the binary files, such as Iris. They are used like this:
...ANSWER
Answered 2020-Sep-22 at 13:52What I would do is probably something like this:
Write a Lambda function in Python that is triggered when new files appear in the S3 bucket – either by S3 notifications (if you control the bucket), by SNS, SQS, or by schedule in EventBridge. The function uses the code snipplet included in your question to transform each new file and upload the transformed data to another S3 bucket.
I don't know the size of these files and how often they are published, so whether to convert to CSV, JSON, or Parquet is something you have to decide – if the data is small CSV will probably be easiest and will be good enough.
With the converted data in a new S3 bucket all you need to do is create an Athena table for the data set and start using QuickSight.
If you end up with a lot of small files you might want to implement a second step where you once per day combine the converted files into bigger files, and possibly Parquet, but don't do anything like that unless you have to.
An alternative way would be to use Athena Federated Query: by implementing Lambda function(s) that respond to specific calls from Athena you can make Athena read any data source that you want. It's currently in preview, and as far as I know all the example code is written in Java – but theoretically it would be possible to write the Lambda functions in Python.
I'm not sure whether it would be less work than implementing an ETL workflow like the one you suggest, but yours is one of the use cases for which Athena Federated Query was designed for and it might be worth looking into. If NetCDF files are common and a data source for such files would be useful for other people I'm sure the Athena team would love to talk to you and help you out.
QUESTION
Quite regularly I find myself in the need of plotting (a lot of) maps of a variety of regions and region sizes. I would like these maps to have ticklabels indicating longitude and latitude (similar to this example: https://scitools.org.uk/cartopy/docs/v0.15/examples/tick_labels.html).
However, the solution suggested there does not work for me since it requires a priori knowledge about the region extend. I've written several way too complicated functions over the years in order to try and make this work in a flexible way. So what I'm wondering at this point: is there a simple solution to put latitude & longitude ticklabels to a map of variable extend?
This here comes somewhat close but is still quite unreliable:
...ANSWER
Answered 2020-Oct-26 at 04:20PlateCaree extends the region with ax.set_extent([min(lon), max(lon), min(lat), max(lat)])
. The ax.pcolormesh()
is commented out because it causes an error. I don't know enough about this point.
QUESTION
The new capability in Cartopy 0.18.0 to add lat/lon labels for any map projection is excellent. It's a great addition to this package. For some maps, especially in polar regions, the lat/lon labels can be very crowded. Here is an example.
...ANSWER
Answered 2020-Sep-23 at 04:53This could be a workaround for your project until a better solution comes up.
QUESTION
The cartopy.feature.NaturalEarthFeature class of cartopy looks like a very convenient way to add high quality map features, but I haven't been able to figure out what values are allowed for the name
parameter at class initialization. The documentation indicates it needs to be a valid dataset name from www.naturalearthdata.com, but the dataset information there does not give clear indication of the datasets' names.
I have tried the obvious such as 'natural-earth-i-with-shaded-relief' (or variant 'natural_earth_i_with_shaded_relief') and other such guesses, but none of my guesses worked. The only names that don't drop a 404 on me are 'land' and 'ocean' under the 'physical' category -- but even then, although the code runs it doesn't render anything for those features. I am expecting some sort of basic land or ocean shading at the very least. Ideally I would like to add physical shaded relief as a backdrop to my data overlay.
...ANSWER
Answered 2020-Jun-16 at 10:58Q: What are the values allowed for the name
parameter of the cartopy command below?
QUESTION
I am playing with iris (really neat!) and I have a list of cities lat/lons I am interested to see average temperature over time. I have netcdf files with air temperatures covering entire country. I would like to tag data points in a cube with lat/lons closest to my cities so then I can easily get values I need just for these cities, or export data just for these cities somewhere.
I imagine I need to use add_categorised_coord somehow? https://scitools.org.uk/iris/docs/latest/iris/iris/coord_categorisation.html#iris.coord_categorisation.add_categorised_coord
I will appreciate an example. Thanks!
...ANSWER
Answered 2020-Jun-15 at 13:28Assuming you have a gridded dataset of air temperature, a better solution would be to interpolate the data to given coordinate points, instead of "tagging" data points in a cube.
This can be done by looping over cities and their coordinates and using cube.interpolate()
method. See https://scitools.org.uk/iris/docs/latest/userguide/interpolation_and_regridding.html#cube-interpolation-and-regridding for examples.
A more optimised solution would be to interpolate the data to all city points at once using the trajectory
module:
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