Phylomark

by jasonsahl Python Version: Current License: No License

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | Phylomark Summary

Phylomark is a Python library. Phylomark has no bugs, it has no vulnerabilities, it has build file available and it has low support. You can download it from GitHub.

Phylomark

Support

Quality

Security

License

Reuse

Support

Phylomark has a low active ecosystem.

It has 3 star(s) with 0 fork(s). There are 2 watchers for this library.

It had no major release in the last 6 months.

There are 1 open issues and 0 have been closed. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of Phylomark is current.

Quality

Phylomark has no bugs reported.

Security

Phylomark has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

Phylomark does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

Phylomark releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Top functions reviewed by kandi - BETA

kandi has reviewed Phylomark and discovered the below as its top functions. This is intended to give you an instant insight into Phylomark implemented functionality, and help decide if they suit your requirements.

Iterate over all the reads in the tree
blast against reference sequence
Get the length of contigs in_fasta
Runs check and align sequences
Runs the subsample loop
Processes fastas txt files
Split fasta files into individual sequences
Run blastn
Load config from stream
Get reduced seqs by id
Change directory owner and group
Combine all FASTA files in a directory
Set file owner
Run a function in a thread with a given channel
Print a debug message
Update dict with nd
Shredded reads_shredded
Check if directory exists
Get the substring between start and end
Receive an item from the queue
Runs the test suite
Map a function on an iterable
Process tmp trees
Check that the tree names and reads are the same
Perform a query without parsing
Install an option for a given option

Get all kandi verified functions for this library.

Phylomark Key Features

No Key Features are available at this moment for Phylomark.

Phylomark Examples and Code Snippets

No Code Snippets are available at this moment for Phylomark.

Community Discussions

No Community Discussions are available at this moment for Phylomark.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install Phylomark

You can download it from GitHub.
You can use Phylomark like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

Find more information at: