h5cat | Quick preview of HDF5 files on the command line
kandi X-RAY | h5cat Summary
kandi X-RAY | h5cat Summary
h5cat is a Python script to quickly preview the contents of an HDF5 file. It is designed to be used in situations where hdfview is overkill. It is distributed under the open-source MIT license.
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Top functions reviewed by kandi - BETA
- Preview the contents of an HDF5 file .
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QUESTION
I've developed a NN Model with Keras, based on the LSTM Layer. In order to increase speed on Paperspace (a GPU Cloud processing infrastructure), I've switched the LSTM Layer with the new CuDNNLSTM Layer. However this is usable only on machines with GPU cuDNN support. PS: CuDNNLSTM is available only on Keras master
, not in the latest release.
So I've generated the weights and saved them to hdf5
format on the Cloud, and I'd like to use them locally on my MacBook. Since CuDNNLSTM layer is not available, only for my local installation I've switched back to LSTM.
Reading this tweet about CuDNN from @fchollet I thought it would work just fine, simply reading the weights back into the LSTM model.
However, when I try to import them Keras is throwing this error:
...ANSWER
Answered 2017-Nov-01 at 19:48The reason is that the CuDNNLSTM
layer has a bias
twice as large as that of LSTM
. It's because of the underlying implementation of cuDNN API. You can compare the following equations (copied from cuDNN user's guide) to the usual LSTM equations:
CuDNN uses two bias terms, so the number of bias weights is doubled. To convert it back to what LSTM
uses, the two bias terms need to be summed.
I've submitted a PR to do the conversion and it's merged. You can install the latest Keras from GitHub and the problem in weight loading should be solved.
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Install h5cat
You can use h5cat like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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