AGAC | Python script to scrap images from Google Arts & Culture | User Interface library
kandi X-RAY | AGAC Summary
kandi X-RAY | AGAC Summary
Python script to scrap images from Google Arts & Culture.
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QUESTION
I am new to c++ and I need help when reading and changing lines from an input file to use the next lines and saving it into another output file.
I have an example of a single DNA sequence stored in .fastq format, with the following structure.
...ANSWER
Answered 2020-Oct-15 at 13:00I think you could make your task much easier overall by reading in the full fastq fragment first, then split it into multiple fragments, and then finally output it all again.
If you make a struct for the fragment and add input and output operators (operator>> and operator<<) for it, then you can do the reading and writing in a very simple way:
QUESTION
The goal of my code is to simulate a very primitive bank by reading banking actions from a text file. I successfully made the program using lists to store the information, but then figured I could redo it using nested dictionaries to remove the need for iteration through the lists.
...ANSWER
Answered 2020-Jul-24 at 17:02Looks like you're trying to use a global dictionary as your class fields.
Consider using proper class definitions as follows
QUESTION
I'm trying to do a website and I've got a problem. My CSS Float is not doing what i want.
This is my HTML Code:
...ANSWER
Answered 2019-Dec-31 at 18:26Add the following properties in .next css class.
QUESTION
I have a dynamic tree structure. I can add 3 elements to this tree structure called " Montaj, Kaynak, Parça and Sarf ".
My Problem: After adding the Parça And Sarf, nothing can be added under them. For example, everything can be added under Montaj and Kaynak , but once you add Parça or Sarf, nothing can be added under them.
How can I do it? ( Some terms are in Turkish. Don't mind ) My current code is the following
...ANSWER
Answered 2019-Jul-18 at 10:25If you want to block people from creating any new nodes under the Parça and Sarf items, then only show the EKLE menu options when the user right-clicks on the nodes that you want them to be added to.
Firstly, you need to be able to distinguish between folder items and normal ones, which means you need to define your types...
QUESTION
via a program I have received the following pattern count.
Counter({'CCCC': 22115, 'TTTT': 22043, 'AAAA': 22037, 'GGGG': 21930, 'AAAC': 154, 'TTAT': 152, 'CCCA': 152, 'CCTC': 152, 'GGGC': 151, 'TTTG': 150, 'GTGG': 149, 'GCCC': 148, 'CCGC': 145, 'CGGG': 145, 'TGGG': 144, 'AGAA': 144, 'TTGT': 144, 'GAAA': 142, 'CCCG': 142, 'CCCT': 142, 'TCCC': 141, 'CAAA': 139, 'ATTT': 137, 'CGCC': 134, 'GGTG': 133, 'GAGG': 133, 'TTTA': 132, 'CTTT': 131, 'TCTT': 131, 'ACCC': 130, 'AGGG': 130, 'GGAG': 129, 'AACA': 129, 'TAAA': 129, 'TATT': 128, 'TTTC': 128, 'AAGA': 127, 'GGGA': 126, 'ACAA': 126, 'TTCT': 125, 'CTCC': 124, 'GCGG': 124, 'ATAA': 123, 'GGCG': 120, 'CACC': 119, 'AAAT': 118, 'AATA': 117, 'AAAG': 114, 'GTTT': 114, 'TGTT': 112, 'GGGT': 112, 'CCAC': 110, 'CGCG': 45, 'AACC': 43, 'TTAA': 41, 'CTCT': 41, 'GGCC': 41, 'ACTC': 40, 'CTTC': 40, 'GCCG': 39, 'ATTA': 39, 'ACCT': 39, 'TGCG': 39, 'ATAT': 39, 'TCTC': 38, 'ACGG': 38, 'TATA': 37, 'ATCA': 37, 'CGGC': 37, 'CGAG': 36, 'AGAG': 36, 'GACA': 35, 'GTTG': 35, 'TGAG': 35, 'TGGT': 35, 'CCAA': 35, 'TTGG': 34, 'GTGT': 34, 'GCGC': 34, 'CACA': 34, 'GTAA': 34, 'GTAG': 34, 'TCCA': 34, 'TCCT': 34, 'AAGG': 34, 'GAGA': 34, 'GCTT': 34, 'GTGC': 33, 'CTAT': 33, 'TTGC': 33, 'CGGA': 33, 'AGGA': 32, 'GACG': 32, 'AATT': 32, 'CAAC': 32, 'CTGC': 32, 'CTAC': 32, 'ACGA': 32, 'CGAC': 32, 'CCGG': 32, 'TCTG': 32, 'GGAA': 32, 'GGAT': 32, 'TGCT': 32, 'TTAG': 32, 'GCTG': 32, 'GAGT': 31, 'AGGC': 31, 'TTCC': 31, 'ATGA': 31, 'TTCA': 31, 'CCAT': 31, 'AAGT': 31, 'GAGC': 31, 'GTAT': 31, 'CGAA': 31, 'TCAT': 31, 'ATTC': 31, 'TGTG': 30, 'AGTT': 30, 'ATCC': 30, 'AGCA': 30, 'GTCT': 30, 'TGTC': 30, 'TCAC': 30, 'CACT': 30, 'ACTA': 30, 'TAAT': 30, 'CCGT': 30, 'CCTA': 29, 'TCGG': 29, 'GGTA': 29, 'TATG': 29, 'AACG': 29, 'CACG': 29, 'GATT': 29, 'ATCT': 29, 'TGGC': 29, 'AGCC': 29, 'TATC': 29, 'GCTC': 29, 'GGCT': 29, 'TCTA': 29, 'AACT': 28, 'CCTT': 28, 'CTTA': 28, 'TGTA': 28, 'TAGT': 28, 'AGTG': 28, 'CCGA': 27, 'AATG': 27, 'CCTG': 27, 'CTGT': 27, 'AGTC': 27, 'GTCC': 27, 'GGTT': 27, 'ACAC': 26, 'TACC': 26, 'CATC': 26, 'CATA': 26, 'GTGA': 26, 'TGAA': 26, 'GGTC': 26, 'CTTG': 26, 'GCAC': 26, 'GGCA': 26, 'CGTC': 26, 'CTGG': 26, 'TAAG': 26, 'TCGT': 26, 'TGAT': 25, 'CAGA': 25, 'GAAC': 25, 'ACCA': 25, 'TTAC': 25, 'CATT': 25, 'AGAT': 25, 'CGGT': 25, 'ATTG': 25, 'TTGA': 25, 'GATA': 24, 'GGAC': 24, 'AAGC': 24, 'GTCA': 24, 'CAAT': 24, 'GCAG': 24, 'ACAT': 24, 'TGCC': 24, 'ATAG': 24, 'CGTG': 24, 'CGCA': 24, 'TAGG': 23, 'ACCG': 23, 'TTCG': 23, 'AGCG': 23, 'GTTC': 23, 'ACTT': 23, 'CGTT': 23, 'AGAC': 23, 'GCAT': 22, 'TCCG': 22, 'TAAC': 22, 'ACGC': 22, 'CAGC': 22, 'GACC': 22, 'CATG': 22, 'TCGA': 22, 'TAGA': 22, 'GCAA': 22, 'CTCG': 22, 'TACT': 22, 'AATC': 21, 'CGCT': 21, 'GAAT': 21, 'GCGT': 21, 'AGTA': 21, 'GCCA': 21, 'ATGG': 21, 'TCAA': 21, 'CTCA': 21, 'TGGA': 20, 'GAAG': 20, 'GATC': 20, 'TGCA': 20, 'GCCT': 19, 'GTCG': 19, 'CAAG': 19, 'TCGC': 19, 'CTGA': 19, 'GATG': 19, 'CTAA': 19, 'GCGA': 19, 'ATAC': 18, 'GTTA': 18, 'GCTA': 18, 'AGGT': 18, 'CCAG': 18, 'ACAG': 18, 'CTAG': 17, 'CGTA': 17, 'ACGT': 17, 'TACA': 17, 'AGCT': 16, 'CAGG': 16, 'ATGT': 16, 'ATCG': 16, 'ATGC': 15, 'TGAC': 14, 'TAGC': 14, 'ACTG': 14, 'TCAG': 14, 'CGAT': 14, 'TACG': 13, 'CAGT': 11, 'GTAC': 10, 'GACT': 9})
I want to convert it now as a list, so that in the first column "AAAA" there are all corresponding values and so also for all combinations. Does anyone have an idea how to program this well?
This is how I read the data into R:
daten <- read.table("/PATTERN.txt", header = FALSE, sep = "\t");
So far I've tried direct reading, but somehow it doesn't really work. It should look like this:
AAAA CCCC
1 22128 22127
Thank you very much!
...ANSWER
Answered 2019-Feb-04 at 13:57This answer may help you in this particular case, but you should insist that whoever produced that result to export in such a way that can be easily imported with every programming language. Here you have a string representation of a python object which is definitely not a good way for exchanging data.
However, you can try this:
QUESTION
My code doesn't adding second node to tree. It gives me SIGSEGV fault when i'm adding the second node.I think its about strcmp function but when i'm trying to understand how it works properly at the very bottom of main func it returns -1 so i've wrote it like this.And most of my variables named Turkish so here are the translations of them to make you understand more easily dugum=node,kok=root;sol=left;sag=right;anne=mother
...ANSWER
Answered 2018-Dec-19 at 22:47You try to dereference a NULL pointer.
QUESTION
eleman* insert( eleman* agac, int eklenecekDeger)
{
// ağacımız tamamen boş ise
if (agac == NULL)
{
// kökümüzü oluşturuyoruz
eleman* kok = (eleman*)malloc(sizeof(eleman));
// kökümüzün sağı ve solunu boş olacakları için NULL yapıyoruz
kok->right = NULL;
kok->left = NULL;
// eklenecek değerimizi ekliyoruz
kok->key = eklenecekDeger;
cout << eklenecekDeger<key < eklenecekDeger)
{
agac->right = insert(agac->right, eklenecekDeger);
}
else // değer kökten küçükse sol alt ağaca geçiyoruz
{
agac->left = insert(agac->left, eklenecekDeger);
}
cout << "eklenen eleman" ;
// ağacımızın son halini geriye döndürüyoruz
return agac;
}
ANSWER
Answered 2018-Oct-20 at 16:59Your function is working correctly.
As can be noticed the insert returns a new head. And in the test You are not storing it!
It should look like this:
QUESTION
Hy Py-guys :). Since I am new in the coding world and as well in Python, I don’t have much experience with coding and thus any help would be appreciated. I am working with short tandem repeats in DNA sequences and I would like to have a code that reads and counts the repeated nucleotides based on the tandem motif of specified loci.
Here is an example what I need:
tandem motif:
...ANSWER
Answered 2018-Jul-11 at 08:31I am sorry that I do not have the time to finish all cases, but hopefully this will give you something to start with.
The design is a linear automaton whose tape is the sequence of nucleotides.
We have a position (pos) variable that marks the index in the sequence that we are working from.
There are also two running accumulating variables: an output string and an integer count of alleles.
Now we have the setup initialised, we can start our iteration over each of the motifs in the tandem motif string. This is done by splitting the string on commas.
Then inside the for-loop, we need to decide which motif case this is (e.g. square bracket repeating, no brackets, N# etc.). For the sake of time, I have only implemented this for the repeating square brackets as it demonstrates the process easily.
Once a test case has been passed, you need to then handle what steps need to be done.
For instance, in this case with the square brackets, the motif is repeating so I initialised an initial count variable to 0 and then jumped pos to the first occurrence of the motif in sequence if pos was 0 - i.e., if this is our first motif, we need to jump our position to the end of the first occurrence. I also increment the count as we have found one motif.
From here, whilst the next characters in sequence are equal to our motif string, we increment the position by the length of the motif (so it is at the end for the next one) and also increment the count.
Finally, we append the formatted string ((motif)#) to the output string and add the number of motifs (alleles) to the master alleles counter.
We then return our output as a dictionary (you could use a tuple if you wanted).
QUESTION
I would like to develop these expressions that are in this form:
...ANSWER
Answered 2018-Feb-20 at 10:30We use gsub to create 1s where there is no number before the [ ('a1'), then extract the letters and numbers separately ('v1', 'v2'), do the replication with strrep and paste the substrings to a single string ('res')
QUESTION
I'd like to write a program that reads in a file and translates a short string of text 4 characters long to a new string of 4 characters. Currently, I read in a tab-delimited text file containing two columns: an "old tag" and a "new tag". I'm able to successfully build a dictionary that maps the "old tag" as the key and the "new tag" as the value.
My problem comes in when I attempt to use maketrans() and str.translate(). Somehow my "old_tag" is getting converted to a "new_tag" that I don't even have in my dictionary! I've attached screenshots of what I mean.
"P020" should get converted to "AGAC" as outline in my dictionary.
Here's my function that does the string translate:
...ANSWER
Answered 2018-Jan-16 at 22:32You should not use maketrans, as it works on individual characters (per the official documentation). Make it a dictionary, with your original text (1st column) as the key and the new text (2nd column) as its value.
Then you can look up any tag x with trn_dict[x], wrapped by a try or with a test beforehand if x in trn_dict.
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Install AGAC
You can use AGAC like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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