skittle | web based genome browser

by josiahseaman Python Version: Current License: GPL-2.0

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | skittle Summary

skittle is a Python library. skittle has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. However skittle build file is not available. You can download it from GitHub.

When starting the dev server, you can pass in the argument "clean" (./startDevServer.sh clean) to clear the cache for ALL graphs. To import all .fa and .fasta files in the "DNAStorage/to_import" folder, run "manage.py importfasta".

Support

Quality

Security

License

Reuse

Support

skittle has a low active ecosystem.

It has 4 star(s) with 3 fork(s). There are 2 watchers for this library.

It had no major release in the last 6 months.

There are 49 open issues and 167 have been closed. On average issues are closed in 76 days. There are 1 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of skittle is current.

Quality

skittle has no bugs reported.

Security

skittle has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

skittle is licensed under the GPL-2.0 License. This license is Strong Copyleft.

Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

Reuse

skittle releases are not available. You will need to build from source code and install.

skittle has no build file. You will be need to create the build yourself to build the component from source.

Installation instructions are not available. Examples and code snippets are available.

Top functions reviewed by kandi - BETA

kandi has reviewed skittle and discovered the below as its top functions. This is intended to give you an instant insight into skittle implemented functionality, and help decide if they suit your requirements.

Splits a file into taxonomic attributes .
Test the test suite .
Parse a numpy array .
Write PNG file .
Parse command line arguments .
Process a PNG chunk .
Imports the GFF file .
Filter a scanline .
Read PNM header from file .
Compute a sequence of sequences and log them .

Get all kandi verified functions for this library.

skittle Key Features

No Key Features are available at this moment for skittle.

skittle Examples and Code Snippets

No Code Snippets are available at this moment for skittle.

Community Discussions

Trending Discussions on skittle

Delete button removes all the children , instead of just the one with the key

How to output the 3 most frequent pattern matches in sorted order in the Linux terminal?

pandas create paired data from a dataframe

Rest Assured Groovy GPath filtering out result

Excel VBA - Delete entire row if cell contains string1 or string2 or string3, etc

trouble multiplying in JavaScript

How do i use my incremented value inside inside an other component

UICollectionView is not reloading search results even with reloadData

Transpose data from multiple rows per person to one row per person in R

list index out of range when printing array

QUESTION

Delete button removes all the children , instead of just the one with the key

Asked 2021-Jun-09 at 11:59

I have researched this topic for quite some time now, yet I still cannot make the 'Remove' button in the child component (ControlledOpenSelect) only remove the item with the key it was passed - by using the callback function.

My ControlledOpenSelect (the child component):

...

ANSWER

Answered 2021-Jun-09 at 11:59

You are not passing the id to the handleRemove method . you need to pass an inline function which passes the item.id as argument

Source https://stackoverflow.com/questions/67903616

QUESTION

How to output the 3 most frequent pattern matches in sorted order in the Linux terminal?

Asked 2021-Apr-18 at 01:33

I have a file called survey.txt in which I used cut -d, -f1 survey.csv to get the following result:

...

ANSWER

Answered 2021-Apr-18 at 01:33

$ sort -f survey.txt | uniq -ic | sort -nr | head -n 3
      7 Twix
      5 Skittles
      4 Sour Patch Kids

Source https://stackoverflow.com/questions/67144394

QUESTION

pandas create paired data from a dataframe

Asked 2020-Nov-05 at 20:28

I have a pd.DataFrame that like this

...

ANSWER

Answered 2020-Nov-05 at 20:25

You can use df.stack()

Source https://stackoverflow.com/questions/64704702

QUESTION

Rest Assured Groovy GPath filtering out result

Asked 2020-Oct-29 at 23:24

I am trying to return the value of "description" in "dependentPreferences" where the response meets two conditions: First, check if the name is "John Smith" and then check if the "image" in preferences equals to "papaya.jpg".

The response body is as follows:

...

ANSWER

Answered 2020-Oct-29 at 23:24

Working example here. This works for me:

Source https://stackoverflow.com/questions/64598049

QUESTION

Excel VBA - Delete entire row if cell contains string1 or string2 or string3, etc

Asked 2020-Aug-19 at 04:58

I would like to remove a row if that row contains a specific string, but I need to do this many times for many strings.

To be more specific, my speadsheet is ~3000 rows and ~30 columns, but this changes every single day. The first column, and the only one I care about, is the name of a node on a network, and if that node starts with or contains a certain word (bananas, Apples, oranges, PINEAPPLES) I need the whole row deleted and everything to shift up

This is what I have so far with help from @chrisneilsen...

This does exactly what I need it to, but is there any code in there that I don't need, or could it be cleaned up? I've mashed up answers and suggestions from a few people and I'm wondering if I've created a monster...

...

ANSWER

Answered 2020-Aug-18 at 23:25

Instead of looping, as already mentioned, you will be better off using built-in tools like filters:

Source https://stackoverflow.com/questions/63477596

QUESTION

trouble multiplying in JavaScript

Asked 2020-Aug-11 at 00:01

     1. let inventory = [
  { candy: "Twizzlers", inStock: 180, weeklyAverage: 200 },
  { candy: "Sour Patch Kids", inStock: 90, weeklyAverage: 100 },
  { candy: "Milk Duds", inStock: 300, weeklyAverage: 170 },
  { candy: "Now and Laters", inStock: 150, weeklyAverage: 40 }
];

// write the shouldWeOrderThisCandy function
function shouldWeOrderThisCandy(inventory){
  for (i = 0; i < inventory.length; i++)


if (inventory[i].inStock < inventory[i].weeklyAverage){ 
for (j = 0; j < inventory[i].weelyAverage.length; j++){
      return inventory[i].weeklyaverage[j] * 2;
   } else {
      return 0;
    }
  }
}

...

ANSWER

Answered 2020-Aug-10 at 23:15

You need to accept the item name as the second parameter.
You can use Array#find to find the inventory item with the specified name.

Source https://stackoverflow.com/questions/63349184

QUESTION

How do i use my incremented value inside inside an other component

Asked 2020-May-30 at 18:43

For school i need to make an react app, it is my first time using, html, css, javascript and react and now i am stuck on part where i have to post the data to an API. My part is to create a page where people can select skittles and when they press oke. The data is send.

I created a single Selector

...

ANSWER

Answered 2020-May-30 at 18:43

I have fixed your code. Actually, you need to pass changed value from Selector to Selectors that is what I have done using onChangedValue props. Moreover, I have changed setState as when you change your state using your current state you should use prevState

Selectors Component

Source https://stackoverflow.com/questions/62104145

QUESTION

UICollectionView is not reloading search results even with reloadData

Asked 2020-Feb-16 at 14:19

I can get the search feature to filter out the results but it won't display those searched results on the iPhone emulator. It displays the results on the iPhone I have (iPhone 5) but not on the emulator. I don't know why they collection view is not updating while I type. The items in the array are being displayed because the I first navigate to that screen I can see them.

...

ANSWER

Answered 2020-Feb-16 at 14:19

The issue is you didn't set a delegate so the search bar callback methods aren't called!

If you use SearchController, you need to add this line to viewDidLoad

Source https://stackoverflow.com/questions/60243908

QUESTION

Transpose data from multiple rows per person to one row per person in R

Asked 2020-Feb-12 at 22:09

I've got data set showing each persons' candy preferences. Each person has multiple rows to display all of the candy that they like, like shown below.

...

ANSWER

Answered 2020-Feb-12 at 22:09

You can summarise() the data by ID and Name, use toString() to collapse the candy variable then separate it into individual columns:

Source https://stackoverflow.com/questions/60197347

QUESTION

list index out of range when printing array

Asked 2020-Jan-30 at 19:36

I am a beginner programmer and I am having issues with the array. I have tried to print with count it always shows the same error which is;

...

ANSWER

Answered 2020-Jan-30 at 18:02

Here I made some adjustments to make your function work. However I would suggest you don't work with lists, instead you could use dictionaries.

Source https://stackoverflow.com/questions/59991745

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install skittle

You can download it from GitHub.
You can use skittle like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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