picard | Easily declare large spaces of neural networks | Machine Learning library

 by   keplr-io Python Version: Current License: No License

kandi X-RAY | picard Summary

kandi X-RAY | picard Summary

picard is a Python library typically used in Artificial Intelligence, Machine Learning, Deep Learning, Pytorch, Keras applications. picard has no bugs, it has build file available and it has high support. However picard has 1 vulnerabilities. You can download it from GitHub.

The format for a picard configuration looks something like this.
Support
    Quality
      Security
        License
          Reuse

            kandi-support Support

              picard has a highly active ecosystem.
              It has 52 star(s) with 5 fork(s). There are 5 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 0 open issues and 1 have been closed. There are no pull requests.
              OutlinedDot
              It has a negative sentiment in the developer community.
              The latest version of picard is current.

            kandi-Quality Quality

              picard has 0 bugs and 8 code smells.

            kandi-Security Security

              picard has 1 vulnerability issues reported (0 critical, 1 high, 0 medium, 0 low).
              picard code analysis shows 0 unresolved vulnerabilities.
              There are 1 security hotspots that need review.

            kandi-License License

              picard does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              picard releases are not available. You will need to build from source code and install.
              Build file is available. You can build the component from source.
              Installation instructions, examples and code snippets are available.
              picard saves you 629 person hours of effort in developing the same functionality from scratch.
              It has 1463 lines of code, 43 functions and 26 files.
              It has high code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed picard and discovered the below as its top functions. This is intended to give you an instant insight into picard implemented functionality, and help decide if they suit your requirements.
            • Return a graph representation of a model specification
            • Draw networkx graph
            • Get the nodes from the edges
            • Get an operator image
            • Get the next state from the given operator
            • Get an operator by name
            • Return the cleaned op name
            Get all kandi verified functions for this library.

            picard Key Features

            No Key Features are available at this moment for picard.

            picard Examples and Code Snippets

            No Code Snippets are available at this moment for picard.

            Community Discussions

            QUESTION

            How to extract a number marked with specific word from text string in Google Data Studio
            Asked 2021-May-05 at 14:13

            I have a text string that contains several instances of numbers, example of the data is below.

            I am trying to extract the number of keys (the number that is followed by the text -keys). I tried several REGEXP_EXTRACT patterns without luck.

            {38-keys,fit-out,closed,eddy-tamy,datechange-feb2025,staff-onboard,sandy-brighton,open-dec2020}

            {same-year,budgeted,signature-done,mark-picard,hotel,5-keys}

            {active,building,itsa-signed,2322-keys,pending-signature,next-year-(construction),opening-feb2024}

            ...

            ANSWER

            Answered 2021-Apr-01 at 09:27
            0) Summary
            • Use #1 OR #2 OR #3 below (added two additional suggestions as the author received an error with #1 and then #2 in regards to the CAST function which may be a result of spacing, Data Source (PostgreSQL) specific or another issue).
            1) With CAST

            It can be achieved by using the Calculated Field below (where Field represents the respective field name) which extracts all digits immediately preceding -keys; the CAST function was added to ensure that the field Type is Number (the default field Type of REGEXP_EXTRACT values are Text); also, for future reference, the Raw Input Literal R was used so that \d represents the sequence for a digit vs the default (without R) in Google Data Studio, which requires two back slashes (\\d):

            Source https://stackoverflow.com/questions/66899431

            QUESTION

            How do I sort a Binary Search Tree from greatest to least?
            Asked 2021-Apr-04 at 19:24

            I need to return an array of nodes sorted from high to low. At the moment I am trying to implement an inorder traversal which gives me the exact opposite of what I'm looking for.

            The tree looks like:

            ...

            ANSWER

            Answered 2021-Apr-04 at 18:34

            You should just swap the two if statements where you make a recursive call, so that you first visit rightReport and then later leftReport.

            Source https://stackoverflow.com/questions/66944539

            QUESTION

            How do I stop a Binary Search Tree Traversal?
            Asked 2021-Apr-03 at 07:22

            I need to traverse a binary search tree and return an array of the leaf nodes. At the moment I am traversing through the entire tree and returning one node at a time.

            My tree looks like:

            ...

            ANSWER

            Answered 2021-Apr-03 at 07:22
            findOfficersWithNoDirectReports() {
                // If this is a leaf node, return the officer name
                if (!this.leftReport && !this.rightReport) {
                  return [this.officerName]
                }
            
                // Otherwise, combine the left and right results 
                val result = []
                if (this.leftReport) {
                  result = result.concat(this.leftReport.findOfficersWithNoDirectReports());
                }
                if (this.rightReport) {
                  result = result.concat(this.rightReport.findOfficersWithNoDirectReports());
               }
                return result;
            
              }
            

            Source https://stackoverflow.com/questions/66925947

            QUESTION

            Swift function that can return various types
            Asked 2021-Mar-06 at 17:35

            Is it possible for a function to return a specific Data Type based on the parameter entered?

            Here's an example of what I'm trying to do:

            I've defined different datatypes that will hold data from an API call

            ...

            ANSWER

            Answered 2021-Mar-06 at 17:13

            You can use protocols:

            Create protocol with given fields, and make all DataType1,2 etc classes conform to it:

            Source https://stackoverflow.com/questions/66508294

            QUESTION

            Mongodb 4.4.x - findOneAndUpdate() with $set and $push
            Asked 2021-Feb-26 at 23:16

            I am trying to do a findOneAndUpdate() to Find a document and update it in one atomic operation

            ...

            ANSWER

            Answered 2021-Feb-26 at 23:16

            Try this, probably will work:

            Source https://stackoverflow.com/questions/66393919

            QUESTION

            Filter users with a join table
            Asked 2020-Nov-09 at 16:53

            I have tables for users, tags, and join table taggings.

            I'm currently using scope to filter users through different variables, for example:

            ...

            ANSWER

            Answered 2020-Nov-09 at 16:53

            You can get a count and use having to stipulate that the user must have one or more tags:

            Source https://stackoverflow.com/questions/64719412

            QUESTION

            How to include shell script suite in docker file
            Asked 2020-Nov-06 at 00:24

            I am trying to create a docker image for BBMAP (https://sourceforge.net/projects/bbmap/files/latest/download) shell script suite available online along with samtools and picard.jar. I was able to run samtools and picard, but for some reason I am not able to add bbmap below. Can someone please let me know what I am missing here?

            I am trying to add shell scripts to bin to run them as executables. In my docker file below, this is where I need help:

            ...

            ANSWER

            Answered 2020-Nov-06 at 00:24

            Earlier in your script, you run:

            Source https://stackoverflow.com/questions/64706962

            QUESTION

            Docker image generating error for /usr/bin/java
            Asked 2020-Nov-03 at 06:11

            I am trying to run this docker image, but not sure why I am getting this error:

            ...

            ANSWER

            Answered 2020-Nov-03 at 06:11

            Exit status 127 means no command found.

            This is due to the java command in openjdk:8-jre not located in /usr/bin/java, see next:

            Source https://stackoverflow.com/questions/64657384

            QUESTION

            Merge vcf files in snakemake
            Asked 2020-Oct-21 at 15:30

            After running the variant calling, I would like to merge only specific outputs as shown in d. This is giving me an error of missing input files. How to solve this?

            ...

            ANSWER

            Answered 2020-Oct-21 at 15:30

            The output of varcall is

            Source https://stackoverflow.com/questions/64465062

            QUESTION

            How to use singularity and conda wrappers in Snakemake
            Asked 2020-Sep-22 at 23:02

            TLDR I'm getting the following error:

            The 'conda' command is not available inside your singularity container image. Snakemake mounts your conda installation into singularity. Sometimes, this can fail because of shell restrictions. It has been tested to work with docker://ubuntu, but it e.g. fails with docker://bash

            I had created a Snakemake workflow and converted the shell: commands to rule-based package management via Snakemake wrappers: .

            However, I ran into issues running this on HPC and one of the HPC support staff strongly recommended against using conda on any HPC system as:

            "if the builder [of wrapper] is not super careful, dynamic libraries present in the conda environment that relies on the host libs (there are always a couple present because builder are most of the time carefree) will break. I think that relying on Singularity for your pipeline would make for a more robust system." - Anon

            I did some reading over the weekend and according to this document, it's possible to combine containers with conda-based package management; by defining a global conda docker container and per-rule yaml files.

            Note: In contrast to the example in the link above (Figure 5.4), which uses a predefined yaml and shell: command, here I've use conda wrappers which download these yaml files into the Singularity container (if I'm thinking correctly) so I thought should function the same - see the Note: at the end though...

            Snakefile, config.yaml and samples.txt Snakefile ...

            ANSWER

            Answered 2020-Sep-22 at 15:02

            TLDR:

            fastqc singularity container used in qc rule likely doesn't have conda available in it, and this doesn't satisfy what snakemake's--use-conda expects.

            Explanation:

            You have singularity containers defined at two different levels - 1. global level that will be used for all rules, unless they are overridden at rule level; 2. per-rule level that will be used at the rule level.

            Source https://stackoverflow.com/questions/64000711

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            picard is a micro framework. picard is vulnerable to a directory traversal issue, giving an attacker access to the filesystem by placing "../" in the url.

            Install picard

            Install right from the repo with pip & git+https.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
            Find more information at:

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            CLONE
          • HTTPS

            https://github.com/keplr-io/picard.git

          • CLI

            gh repo clone keplr-io/picard

          • sshUrl

            git@github.com:keplr-io/picard.git

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