gata | data validation and transformation library | Validation library
kandi X-RAY | gata Summary
kandi X-RAY | gata Summary
Gata is a toolbox library for python's dataclasses which allows to serialise/deserialise/validate complex dataclasses.
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QUESTION
I am on Python 3.8 and using Spacy 2.3.5. I tried to use EntityRuler to assign a new label 'TH-T-MARKER' to a group of entities, and then to visualize them in displacy. Here's the code:
...ANSWER
Answered 2021-Apr-06 at 08:23It looks like you're using spaCy v2?
The issue here is that because you've used the {"TEXT":{"IN":{...}}
structure you're only matching single tokens. Because your targets have punctuation in them it's probably getting split into multiple tokens and therefore not matching.
One of the advantages of the EntityRuler is that you don't have to worry about how the tokenizer works if you just hand the pattern over. Here's how you can do that, in which case all your entities are matched:
QUESTION
I'm making a memory game in C#. It has 10 pairs of cards, total 20. It's supposed to work like this: When pressing the Start button, the game shuffles randomly the cards and reveals all cards. After 3 seconds it flips them. Then, the player has to find all pairs.
I'm having a problem with shuffling. I wrote this code. It's being executed when I press the Start button:
...ANSWER
Answered 2021-Jan-28 at 16:01In addition to the recommendations around managing the PictureBox controls in arrays, I would recommend you change the line (not shown) where you create the Random object to something like this:
QUESTION
I've got a program to find DNA matches. We've been given a one line text file for finding the longest sequence of STR(Short Tandem Repeats) then match the result with a database which has been a .cvs file as below:
...ANSWER
Answered 2020-Nov-21 at 12:53I used the data you provided and made a test.csv
QUESTION
I'm attempting to work through finding the amount of consecutive STRs (a substring pattern, i.e. "AGAT") in a sequence file.
String Patterns: AGATC,TTTTTTCT,AATG,TCTAG,GATA,TATC,GAAA,TCTG
Sequence file(one of many other sequence files): AAGGTAAGTTTAGAATATAAAAGGTGAGTTAAATAGAATAGGTTAAAATTAAAGGAGATCAGATCAGATCAGATCTATCTATCTATCTATCTATCAGAAAAGAGTAAATAGTTAAAGAGTAAGATATTGAATTAATGGAAAATATTGTTGGGGAAAGGAGGGATAGAAGG
In the above sequence, TATC is the maximum with a run of 5 consecutive TATC pairs. With my regular expression, it is returning matches whether they are consecutive or not.
I believe using regular expressions is my best bet. This is my first time working in Python so don't expect too much. I've used the regex tool at regex101.com and it has provided me some good insight into regex formulations. I'm passing a variable into the regex with {head}, which which is the string pattern, but I want to find the matched string {head}
2 or more times. My below regex returns a match to head
at least 1 or more times, so I know why that is returning the way it does.
ANSWER
Answered 2020-Oct-29 at 17:48You can use pattern ((your pattern)\2*)
in your regular expression to find largest consecutive pattern (regex101 for pattern TATC
):
QUESTION
(Apologies this is gonna be a long question)
I just have a bug in my code that I have not been able to resolve for a very long time. I would really appreciate if someone could help me find out what the problem is.
Context:
I have a long string of letters - lets call this subject
- containing the letters A, G, T and C (like DNA) and the whole point of my algorithms is to correctly count how many of each of the following STRs
are found within subject
. The STRs are:
AGATC
TTTTTTCT
AATG
TCTAG
GATA
TATC
GAAA
TCTG
I must count how many of each are within subject
. Counting works by going sequentially letter by letter until the start of one of above STRs
are found. If the rest of the STR
follows, the program should update the counter of the respective STR
and then boost the searching index to account of the length of the STR
and then keep going. It should stop when it reaches the end of subject
.
(Hope it makes sense).
My Code:
...ANSWER
Answered 2020-Oct-05 at 16:13Does this help?
QUESTION
I'm trying to build a notebook for beginners as me, to plot the Google Gata Mobility Report, but I'm having trouble adjusting on a single image all the plots and save them on a single file. What can I do to get that output?
Here's the original code:
...ANSWER
Answered 2020-Aug-13 at 18:38Is this what you're looking for? If so, you were very close. The subplots
command allows you to set a grid of axes within the figure that are contained in a numpy array. Then instead of plt.plot
you use ax.plot
, and so forth for setting properties.
QUESTION
I'm hoping you can help point me in the right direction as I'm very new to programming and Python in particular. I'm trying to find maximum repeat counts of certain substrings in a larger string. For example, how many times does 'AGATC'
repeat in a much longer string (it might appear only at one place but four times in a row at another place).
I've been reading up on regex for this and have written the code below. It will successfully print out repetitions for each pattern seperately, however, I need to know the repetition count for when it appears. Example output of my code looks like this:
...ANSWER
Answered 2020-Aug-12 at 22:05If I understand your problem correctly, you could do this separately for each pattern, e.g. something like:
QUESTION
I have a dictionary that contains the following:
...ANSWER
Answered 2020-Aug-02 at 21:52Here is a for-loop that you can try out.
QUESTION
PSet 6 DNA from CS50.
I have CSV file with header and values:
...ANSWER
Answered 2020-Jun-06 at 16:13With Python 3.7. Is the below what you are looking for?:
QUESTION
I'm trying to get value from API using amp-state but the problem is it's like you need to do an action to get the data.
...ANSWER
Answered 2020-May-25 at 13:59how to get data using amp-state without any action ?
As stated in the documentation:
amp-bind expressions are not evaluated on page load, but only after an user interaction has taken place. Initial amp-list content still needs to be fetched from a JSON endpoint.
Link: https://amp.dev/documentation/examples/components/amp-list/?format=websites#rendering-amp-state
This part: [text]="currentTime.time"
is related to amp-bind. Therefore, this is not possible. Use the amp-list:
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Install gata
You can use gata like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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