spine | Code of the paper SPINE : Structural Identity Preserved | Machine Learning library

 by   lemmonation Python Version: Current License: MIT

kandi X-RAY | spine Summary

kandi X-RAY | spine Summary

spine is a Python library typically used in Artificial Intelligence, Machine Learning, Pytorch applications. spine has no bugs, it has a Permissive License and it has high support. However spine has 2 vulnerabilities and it build file is not available. You can download it from GitHub.

This repository provides a reference implementation of the paper "SPINE: Structural Identity Preserved Inductive Network Embedding". SPINE is an inductive embedding method which can simultaneously preserve the local proximity and the structural identity of nodes. Details can be found here.
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            kandi-support Support

              spine has a highly active ecosystem.
              It has 12 star(s) with 3 fork(s). There are 3 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 0 open issues and 1 have been closed. On average issues are closed in 50 days. There are no pull requests.
              It has a positive sentiment in the developer community.
              The latest version of spine is current.

            kandi-Quality Quality

              spine has no bugs reported.

            kandi-Security Security

              spine has 2 vulnerability issues reported (0 critical, 1 high, 1 medium, 0 low).

            kandi-License License

              spine is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              spine releases are not available. You will need to build from source code and install.
              spine has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions are not available. Examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi has reviewed spine and discovered the below as its top functions. This is intended to give you an instant insight into spine implemented functionality, and help decide if they suit your requirements.
            • Load pdata
            • Convert a sparse matrix to a tuple
            • Parse an index file
            • Generate a mask from a given index
            • Load an adjacency list
            • Make undirected directed graph
            • Make consistent set consistent
            • Mask nodes in graph
            • Returns a subgraph of the current graph
            • Builds the model
            • Builds a deep walk corpus
            • Generate a random walk
            • Shuffle the graph
            • Load a directed graph from a file
            • Connects the model
            • Create a list of random walks from a graph
            • Random walk
            • Build the model
            • Build the graph
            • Calculate the loss
            • Sample an aggregation function
            • Returns the test and test feed
            • Load pandas data
            • Generate node feed dictionary
            • Return next minibatch feed
            • Generate a dictionary of feed data
            Get all kandi verified functions for this library.

            spine Key Features

            No Key Features are available at this moment for spine.

            spine Examples and Code Snippets

            No Code Snippets are available at this moment for spine.

            Community Discussions

            QUESTION

            Calculation of the first and third quartile
            Asked 2021-Jun-09 at 14:05

            I'm trying to calculate the mean, standard deviation, median, first quartile and third quartile of the lognormal distribution that I fit to my histogram. So far I've only been able to calculate the mean, standard deviation and median, based on the formulas I found on Wikipedia, but I don't know how to calculate the first quartile and the third quartile. How could I calculate in Python the first quartile and the third quartile, based on the lognormal distribution?

            ...

            ANSWER

            Answered 2021-Jun-08 at 20:07

            Given a log-normal distribution, we want to compute its quantiles. Furthermore, the parameters of the log-normal distribution are estimated from data.

            The script below uses OpenTURNS to create the distribution using the LogNormal class. It takes as inputs arguments the mean and standard deviation of the underlying normal distribution. Then we can use the computeQuantile()method to compute the quantiles.

            Source https://stackoverflow.com/questions/67886115

            QUESTION

            How to have 2 different scales on same Y axis in Python using Matplotlib
            Asked 2021-Jun-04 at 07:21

            I need to draw 4 X vs Y plots, where X is constant but different Y Values. I used below code to get the plots but need to show the Y scale on either side of the Secondary Y axes (Y Axis 2 in the image), the way Primary Y Axis has (both inward and outward). Right now, it comes on same side of Secondary Y Axis. How to modify the below code to get this done.

            ...

            ANSWER

            Answered 2021-Jun-04 at 07:21

            On your 4th axes, set tick_left and move the left spine to the right-hand side:

            Source https://stackoverflow.com/questions/67827623

            QUESTION

            How to map single object JSON containing other objects
            Asked 2021-May-27 at 18:42

            The returned JSON has a structure like this:

            ...

            ANSWER

            Answered 2021-May-27 at 18:42

            Render the result of Object.values(meds):

            Source https://stackoverflow.com/questions/67727905

            QUESTION

            Matplotlib display grid line at bottom instead of spine
            Asked 2021-May-26 at 19:45

            I'm trying to reproduce the following image using matplotlib

            I figured I have two options to deal with the top and bottom grid lines: format the top/bottom spine to match the formatting of the grid lines, or turn off all spines and just display grid lines. I've gone with the latter, as it seems more straightforward:

            ...

            ANSWER

            Answered 2021-May-26 at 19:45

            ax.grid() has a parameter clip_on= that can be set to False to avoid clipping by the axes borders.

            Source https://stackoverflow.com/questions/67711513

            QUESTION

            Start the Y ticks at origin of graph and end tick where the axis ends in matplotlib pyplot
            Asked 2021-May-24 at 11:24

            I want the axis ticks to start and end where the axis starts and ends

            I have multiple columns which needs to be plotted at once. In the for loop I cannot define the y ticks for each and every column because they have different range of values. I want a code that does the axis setting as shown in the picture for every column's plot

            This is the snippet of the code that I am using

            ...

            ANSWER

            Answered 2021-May-24 at 11:24

            Just add plt.ylim(top=plt.yticks()[0][-1]) at the end of your loop. This exploits the fact that the automatically generated yticks also contain the next-higher tick, even though it's not visible. For example,

            Source https://stackoverflow.com/questions/67670076

            QUESTION

            Snowflake SQL: Need a Date Spine added to Existing Table Columns
            Asked 2021-May-19 at 03:33

            I have two separate tables. Table1 contains only 1 column, called date_spine and it has all dates from 2021-01-01 to current date. Table2 contains distinct columns of State, Store. My final goal is to create a new Table which contains all Dates in the Data Spine against every unique State, Store combination. Below is a brief example. I am hoping for SQL Script which will work in Snowflake. Thank you in advance!!

            State Store Date_Spine IL Chicago 2021-01-01 IL Chicago 2021-01-02 IL Chicago 2021-01-03 IL Chicago 2021-01-04 IL Chicago 2021-01-05 MO St Louis 2021-01-01 MO St Louis 2021-01-02 MO St Louis 2021-01-03 MO St Louis 2021-01-04 MO St Louis 2021-01-05 ...

            ANSWER

            Answered 2021-May-19 at 03:33

            You may use a cross join approach with calendar tables:

            Source https://stackoverflow.com/questions/67596546

            QUESTION

            Elasticsearch Mapping for array
            Asked 2021-May-18 at 07:35

            I have the following document for which I need to do mapping for elasticsearch

            ...

            ANSWER

            Answered 2021-May-18 at 07:35

            There is no need to specify any particular mapping for array values.

            If you will not define any explicit mapping, then the rows field will be dynamically added as of the text data type

            There is no data type that is defined for arrays in elasticsearch. You just need to make sure that the rows field contains the same type of data

            Adding a working example with index data, search query, and search result

            Index Mapping:

            Source https://stackoverflow.com/questions/67581594

            QUESTION

            move third y-axis to right
            Asked 2021-May-15 at 17:30
            import matplotlib.pyplot as plt
            
            fig, ax = plt.subplots()
            fig.subplots_adjust(right=0.75)
            
            twin1 = ax.twinx()
            twin2 = ax.twinx()
            
            #twin2.spines.right.set_position(("axes", 1.2))
            
            p1, = ax.plot([0, 1, 2], [0, 1, 2], "b-", label="Density")
            p2, = twin1.plot([0, 1, 2], [0, 3, 2], "r-", label="Temperature")
            p3, = twin2.plot([0, 1, 2], [50, 30, 15], "g-", label="Velocity")
            
            ax.set_xlim(0, 2)
            ax.set_ylim(0, 2)
            twin1.set_ylim(0, 4)
            twin2.set_ylim(1, 65)
            
            ax.set_xlabel("Distance")
            ax.set_ylabel("Density")
            twin1.set_ylabel("Temperature")
            twin2.set_ylabel("Velocity")
            
            ax.yaxis.label.set_color(p1.get_color())
            twin1.yaxis.label.set_color(p2.get_color())
            twin2.yaxis.label.set_color(p3.get_color())
            
            tkw = dict(size=4, width=1.5)
            ax.tick_params(axis='y', colors=p1.get_color(), **tkw)
            twin1.tick_params(axis='y', colors=p2.get_color(), **tkw)
            twin2.tick_params(axis='y', colors=p3.get_color(), **tkw)
            ax.tick_params(axis='x', **tkw)
            
            ax.legend(handles=[p1, p2, p3])
            
            plt.show()
            
            ...

            ANSWER

            Answered 2021-May-15 at 17:30

            EDIT: It isn't a bug apparently - it's a feature added in version 3.4.0

            This might be a bug - as it only happens when trying to run twin2.spines.right.set_position(("axes", 1.2)) on the ipython terminal and not if you call it from a script. Perhaps the ordered dictionary values are not being correctly set as attributes, as they seems to be present:

            Source https://stackoverflow.com/questions/67529651

            QUESTION

            Rotating circle going around the circumference of a larger circle on Matplotlib?
            Asked 2021-May-15 at 15:02

            I'm trying to use matplotlib to make a program that will use any two circles (any radius) and the adjacent circle will rotate around the main larger circle. I've looked at matplotlib.animation and it doesn't seem to work. Apparently animations just won't work with shapes?

            Here's my code so far (I've deleted the animations subroutine as they seem to just brick the program)

            ...

            ANSWER

            Answered 2021-May-15 at 15:02

            You can use Matplotlib FuncAnimation with a function as argument (update in the code below) to call at each new frame. Use theta2 as argument to the update function (trough the frames parameter in the FuncAnimation) and use it together with the already declared variables x3 and x4 to give the perception of the smaller circle progressing around the larger one. Next, use set_data to allow the circlemove object to display different data points for each new frame.

            Source https://stackoverflow.com/questions/67453152

            QUESTION

            Is there a more efficient way to find the contour of this object and fill the blank spaces in python?
            Asked 2021-May-10 at 14:28

            I am trying to improve this image with the help of morphological operations. The result I get is good but it takes almost 40 seconds to get the resulting image and I was wondering if there is any other method to get a similar or even better result without taking too long.

            Below I attach the images and the code that i used to enhance the original image. Thanks

            Original spine image Final spine image

            ...

            ANSWER

            Answered 2021-May-10 at 14:28

            Almost all of your time is being taken up by the closing function. This is mostly because that function's runtime scales terribly with kernel size and disk(40) is probably an 80x80 kernel under the hood. We can approximate the same thing by downscaling the image and running an equivalent-sized kernel on the smaller image.

            Source https://stackoverflow.com/questions/67461447

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            Cross-site request forgery (CSRF) vulnerability in SPINE allows remote attackers to perform unauthorized actions as administrators via unspecified vectors. NOTE: some of these details are obtained from third party information.
            Multiple unspecified vulnerabilities in SPINE before 1.2 have unknown impact and attack vectors, related to (1) "Placeholders in database handler" and (2) "Macro admin security."

            Install spine

            You can download it from GitHub.
            You can use spine like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            https://github.com/lemmonation/spine.git

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            gh repo clone lemmonation/spine

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            git@github.com:lemmonation/spine.git

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