lyman | Data pipelines and analysis library for functional MRI

by mwaskom Python Version: 2.0.0 License: BSD-3-Clause

X-Ray Key Features Code Snippets Community Discussions(3)Vulnerabilities Install Support

kandi X-RAY | lyman Summary

lyman is a Python library typically used in Data Science applications. lyman has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can install using 'pip install lyman' or download it from GitHub, PyPI.

[Code Coverage] Lyman is a platform for analyzing neuroimaging (primarily MRI) data using Python. It comprises an interface to [Nipype] data processing workflows and a library of classes and functions for signal processing, model fitting, visualization, and other tasks.

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Support

lyman has a low active ecosystem.

It has 31 star(s) with 20 fork(s). There are 2 watchers for this library.

It had no major release in the last 12 months.

There are 19 open issues and 94 have been closed. On average issues are closed in 277 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of lyman is 2.0.0

Quality

lyman has 0 bugs and 0 code smells.

Security

lyman has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

lyman code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

lyman is licensed under the BSD-3-Clause License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

lyman releases are available to install and integrate.

Deployable package is available in PyPI.

Build file is available. You can build the component from source.

Installation instructions, examples and code snippets are available.

lyman saves you 2353 person hours of effort in developing the same functionality from scratch.

It has 5952 lines of code, 271 functions and 27 files.

It has low code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed lyman and discovered the below as its top functions. This is intended to give you an instant insight into lyman implemented functionality, and help decide if they suit your requirements.

The main run interface
Build a design matrix
Convert a condition to regressor basis set
Generate a highpass filter matrix
Run the timeseries
Write a time series to a gif
Submits the given commandline
Detrend from data
Run the analysis
Save the figure to a file
R Compute contrast between fixed effects
Runs the fitting method
Generate an unwarp image
Run the interface
Creates a mosaic image
Plot the inverse mask
Smooth data
Plots the anat image
Run the simulation
Combine the pre - warp transform
Compute the intersection of the run
Run the registration
Run model fitting
Runs the run interface
Run the workflow
Run the runtime interface

Get all kandi verified functions for this library.

lyman Key Features

No Key Features are available at this moment for lyman.

lyman Examples and Code Snippets

No Code Snippets are available at this moment for lyman.

Community Discussions

Trending Discussions on lyman

XSLT: Trying to combine two nodes based on the value of an element of those two nodes

How to extract the slope coefficient from tidy data frame made with Broom Package R

ValueError: substring not found, please save me

QUESTION

XSLT: Trying to combine two nodes based on the value of an element of those two nodes

Asked 2021-Nov-14 at 06:34

I am struggling with XSLT and have been for days. I'm in the process of modifying a previous coworkers python code that transforms many different JSON files into xml and finally into kml. I'm within a hairs breadth of wrapping this up and, of course, the one part I can't get my head around is what's left.

I have an xml file with this structure:

...

ANSWER

Answered 2021-Nov-13 at 09:57

I think you need to "step" in at the document level and do e.g.

Source https://stackoverflow.com/questions/69951148

QUESTION

How to extract the slope coefficient from tidy data frame made with Broom Package R

Asked 2020-Oct-23 at 18:33

I'm trying out the tidy methods that Hadley Wickham describes in this video: https://www.youtube.com/watch?v=rz3_FDVt9eg&t=1902s. It's straightforward to get certain statistics this way, as long as there is only 1 row in the tidied data frame, but the slope of each linear model is buried in the 2nd row of a tidied data frame made with Broom. My code is very similar to Hadley's, and looks like this.

...

ANSWER

Answered 2020-Oct-23 at 18:29

You can just pick the 2nd element of the "estimate" column of the broom output:

Source https://stackoverflow.com/questions/64505302

QUESTION

ValueError: substring not found, please save me

Asked 2020-May-12 at 18:34

So, I am trying to make a sorter that sorts text by its chronological order on a paper.

The algorithm:

...

ANSWER