tnn | Biologically-realistic recurrent | Machine Learning library

 by   neuroailab Python Version: Current License: No License

kandi X-RAY | tnn Summary

kandi X-RAY | tnn Summary

tnn is a Python library typically used in Artificial Intelligence, Machine Learning, Deep Learning, Tensorflow, Neural Network applications. tnn has no bugs, it has no vulnerabilities, it has build file available and it has low support. You can download it from GitHub.

Biologically-realistic recurrent convolutional neural networks
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            kandi-support Support

              tnn has a low active ecosystem.
              It has 84 star(s) with 13 fork(s). There are 11 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              tnn has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of tnn is current.

            kandi-Quality Quality

              tnn has 0 bugs and 0 code smells.

            kandi-Security Security

              tnn has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              tnn code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              tnn does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              tnn releases are not available. You will need to build from source code and install.
              Build file is available. You can build the component from source.
              Installation instructions, examples and code snippets are available.
              It has 3887 lines of code, 157 functions and 14 files.
              It has high code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed tnn and discovered the below as its top functions. This is intended to give you an instant insight into tnn implemented functionality, and help decide if they suit your requirements.
            • Builds a neural network layer
            • Crop the input layer
            • Gather inputs from input layer
            • Depth preprocessor
            • Compute spatial layer
            • Construct a regularizer
            • Create a regularizer function for a regularizer
            • Create a laplacian regularizer
            • Unroll a TF tensor
            • Topological sort
            • Check that all inputs are in the given graph
            • Creates a NetworkX graph from a json file
            • Imports nodes and edges from a json file
            • Get function from kwargs
            • Layer convolutional convolution layer
            • Wrapper for shared_spatial_mlp
            • Creates a feedforward network
            • Unroll a graph
            • Batch spatial transformer
            Get all kandi verified functions for this library.

            tnn Key Features

            No Key Features are available at this moment for tnn.

            tnn Examples and Code Snippets

            No Code Snippets are available at this moment for tnn.

            Community Discussions

            QUESTION

            Recognition and conversion of characters in specific positions
            Asked 2021-Nov-17 at 08:42

            Input:

            ...

            ANSWER

            Answered 2021-Nov-17 at 08:42

            Write a custom function:

            Source https://stackoverflow.com/questions/69985594

            QUESTION

            How to use pandas apply method, in case you need a parameterized function
            Asked 2021-Nov-17 at 08:19

            Input:

            ...

            ANSWER

            Answered 2021-Nov-17 at 08:19

            I fixed your code.

            Setup:

            Source https://stackoverflow.com/questions/70000349

            QUESTION

            Jax/Flax (very) slow RNN-forward-pass compared to pyTorch?
            Asked 2021-Oct-29 at 19:38

            I recently implemented a two-layer GRU network in Jax and was disappointed by its performance (it was unusable).

            So, i tried a little speed comparison with Pytorch. Minimal working example

            This is my minimal working example and the output was created on Google Colab with GPU-runtime. notebook in colab

            ...

            ANSWER

            Answered 2021-Oct-29 at 13:49

            The reason the JAX code compiles slowly is that during JIT compilation JAX unrolls loops. So in terms of XLA compilation, your function is actually very large: you call rnn_jax.apply() 1000 times, and compilation times tend to be roughly quadratic in the number of statements.

            By contrast, your pytorch function uses no Python loops, and so under the hood it is relying on vectorized operations that run much faster.

            Any time you use a for loop over data in Python, a good bet is that your code will be slow: this is true whether you're using JAX, torch, numpy, pandas, etc. I'd suggest finding an approach to the problem in JAX that relies on vectorized operations rather than relying on slow Python looping.

            Source https://stackoverflow.com/questions/69767707

            QUESTION

            Pytorch - element 0 of tensors does not require grad and does not have a grad_fn - Adding and Multiplying matrices as NN step parameters
            Asked 2021-Aug-26 at 15:48

            I am a newbie in PyTorch.

            I have implemented a custom model (based on a research paper), I get this error when trying to train it.

            element 0 of tensors does not require grad and does not have a grad_fn

            Here is my code for model:

            ...

            ANSWER

            Answered 2021-Aug-26 at 15:48

            You are inferring the outputs using the torch.no_grad() context manager, this means the activations of the layers won't be saved and backpropagation won't be possible.

            Therefore, you must replace the following lines in your train function:

            Source https://stackoverflow.com/questions/68941491

            QUESTION

            Mask datasets to make dimensions identical in Xarray (using where function)
            Asked 2021-Jul-08 at 20:36

            I came across this simple problem, but I haven't found my way around it. I have two datasets (DS_clim and DS_yield), which I would like to compare across the three dimensions (time, lat, lon). However, their dimensions are not exactly the same, therefore I thought of using xr.dataarray.where to mask/crop both of them and therefore have the exact same dimensions. Funny enough, the output is still not compatible, with DS_yield having more datapoints than DS_clim. If anyone could help me make them identical in terms of dimension, I would really appreciate. I uploaded both .nc files and below you can find a self-standing piece of code that should replicated it.

            Cheers!

            Link for downloading the two files: https://drive.google.com/file/d/1gDSoKOY6eFLHqZ4AM0TTr4tXEBu3Y6yM/view?usp=sharing https://drive.google.com/file/d/1ysLqxNz-FBykJS2KojAx0UgTy6Hd9Wc2/view?usp=sharing

            ...

            ANSWER

            Answered 2021-Jul-08 at 20:36

            You could simply use the intersection of indexes:

            Source https://stackoverflow.com/questions/68289491

            QUESTION

            Custom function to matrix columns pairs
            Asked 2021-Jun-03 at 15:55

            Good afternoon ,

            Assume we have the following matrix :

            ...

            ANSWER

            Answered 2021-Jun-03 at 15:20
            1. outer expects a binary function. I’m assuming this was a typo in your code.

            2. outer treats the function passed to it as vectorised. Your function isn’t (because intersection isn’t). But you can vectorise it using mapply:

            Source https://stackoverflow.com/questions/67823983

            QUESTION

            Pytorch: No training effect after deepcopy
            Asked 2020-Dec-15 at 06:35

            I tried to make a copy of a neural network in pytorch and subsequently train the copied network, but training does not seem to change the weights in the network after copying. This post suggests that deepcopy is a convenient way to make a copy of a neural network, so I tried using that in my code.

            The code below works just fine and shows that the weights and accuracy of the network are different after training from before training. However, when I toggle so that network_cp=deepcopy(network) and optimizer_cp=deepcopy(optimizer), the accuracy and weights before and after training are exactly the same.

            ...

            ANSWER

            Answered 2020-Dec-15 at 06:35

            After optimizer_cp = deepcopy(optimizer), the optimizer_cp still wants to optimize the old model's parameters (as defined by optimizer = optim.SGD(network.parameters(), lr=learning_rate, momentum=momentum)).

            After deep copying the model, the optimizer needs to be told to optimize this new model's parameters:

            optimizer_cp = optim.SGD(network_cp.parameters(), lr=learning_rate, momentum=momentum)

            Source https://stackoverflow.com/questions/65298796

            QUESTION

            Attempting to implement a C++ library, need some pointers on how to interface with it
            Asked 2020-Oct-07 at 05:46

            I'm relatively inexperienced in C++, and am trying to compile a library to DLL for use in Unity. As far as generating the DLL and interfacing with it, I've had success in getting my below function to call and return a dummy value in Unity, no worries.

            Where I'm struggling is working out how to interface with this Approximate Nearest Neighbour library, and could use some pointers. (This may be a hard problem to define without downloading the above-linked source and having a look yourself, but I will attempt to make it simple)

            In Unity, I have a three-dimensional array (points[] = float[x,y,z]), and a query point in space (float[x,y,z]). I wish to feed this data into something like the below function (which I have modified from the ann_sample.cpp - original linked at the bottom), and return the nearest neighbour to this point.

            My function

            ...

            ANSWER

            Answered 2020-Oct-07 at 05:46

            Update:
            Writing this all out was evidently the push I needed in the right direction! In case it's relevant for anyone in the future, the manner through which I interfaced with it was fairly straightforward.

            I passed a few 2D arrays into the C++ plugin, which I then converted into ANNpointArrays. Given it's C++, I needed to first instantiate the arrays of the appropriate size, then populate as the below:

            Source https://stackoverflow.com/questions/64218339

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install tnn

            You can download it from GitHub.
            You can use tnn like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            https://github.com/neuroailab/tnn.git

          • CLI

            gh repo clone neuroailab/tnn

          • sshUrl

            git@github.com:neuroailab/tnn.git

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