RDF | A code to compute the radial distribution function

 by   qzhu2017 Python Version: Current License: No License

kandi X-RAY | RDF Summary

kandi X-RAY | RDF Summary

RDF is a Python library. RDF has no bugs, it has no vulnerabilities and it has low support. However RDF build file is not available. You can download it from GitHub.

A code to compute the radial distribution function. This branch is initally planned for the undergraduate student's project on machine learning materials properties. One could load the crystal from. To perform RDF calculation, one needs to provide the following info.
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            kandi-support Support

              RDF has a low active ecosystem.
              It has 11 star(s) with 6 fork(s). There are 1 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 2 open issues and 0 have been closed. On average issues are closed in 923 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of RDF is current.

            kandi-Quality Quality

              RDF has no bugs reported.

            kandi-Security Security

              RDF has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              RDF does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              RDF releases are not available. You will need to build from source code and install.
              RDF has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions are not available. Examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi has reviewed RDF and discovered the below as its top functions. This is intended to give you an instant insight into RDF implemented functionality, and help decide if they suit your requirements.
            • Compute the RDF of the crystal
            • Find supercell in crystal lattice
            • Plot the RDF of the model
            • Smooth a 2D image
            Get all kandi verified functions for this library.

            RDF Key Features

            No Key Features are available at this moment for RDF.

            RDF Examples and Code Snippets

            No Code Snippets are available at this moment for RDF.

            Community Discussions

            QUESTION

            Fastest way to check if an URL is valid in bash script
            Asked 2021-Jun-08 at 12:56

            I have a file called test. It looks like this (sample):

            ...

            ANSWER

            Answered 2021-Jun-08 at 12:56

            With a touch of caution, it might be worth trying to parallelise these to reduce the overall time. But you might hit some other bottleneck.

            This is not tested, but hopefully might be enough to help you to give it a go:

            Source https://stackoverflow.com/questions/67885936

            QUESTION

            SPARQL Inference with SKOS
            Asked 2021-Jun-08 at 12:26

            We are trying to showcase inference with linked-data.

            The simple graph looks like the following in turtle-format:

            ...

            ANSWER

            Answered 2021-Jun-08 at 12:26

            To complete the question, I'm posting my comment above as an answer...

            To make it work, You need to define some meaning to your properties ex:isPartOf and ex:livesIn. Suggest to make ex:isPartOf transitive and then to define ex:livesIn as a property chain over ex:isPartOf, e.g.:

            Source https://stackoverflow.com/questions/67786448

            QUESTION

            Not able to get XML file via MarkLogic Corb Tool
            Asked 2021-Jun-07 at 21:24

            I want to get xml input file via the MarkLogic CoRB Tool to proceed further, but not able to get this file via CoRB tool:

            ML config Properties file:

            ...

            ANSWER

            Answered 2021-Jun-07 at 21:24

            The CoRB StreamingXPath is not currently able to register and leverage namespaces and namespace-prefixes, so the XPath targeting namespace-qualified elements can't leverage namespace-prefixes.

            A more generic match on the document element with a predicate filtering by local-name() will work though. It's a little ugly and a lot more typing, but works:

            Source https://stackoverflow.com/questions/67877088

            QUESTION

            Google in-app billing, a toast breaks everything
            Asked 2021-Jun-07 at 15:17

            I don't even know what title this question should have.

            So, I am working on a library to make Google-Billing as easy as possible to integrate.

            Everything started after I've upgraded the library to Google's Billing v4 which replaces Purchase#getSku with Purchase#getSkus().

            This is the before and after migration to billing v4:

            Before (v3 library):

            ...

            ANSWER

            Answered 2021-Jun-07 at 10:27

            In V4.0 BillingClient method callbacks call in background thread, not in Main thread.

            Workaround is to change thread to Main in BillingClient callbacks.

            Call you method processPurchases() with Toast in UI thread.

            Source https://stackoverflow.com/questions/67864418

            QUESTION

            Learn structure of XML file in preparation for CSV or RDF conversion
            Asked 2021-Jun-06 at 17:58

            I would like to convert NCBI's Biosample Metadata XML file to CSV, or RDF/XML as a second choice. To do that, I believe I have to learn more about the structure of this file. I can run basic XQueries in BaseX*, like just listing all values, but then I've been using shell tools like sort|uniq -c to count them. I have heard about XSLT transformations and GRDDL in passing, but I don't think a style sheet is provided for this XML document, and I don't know how to create or discover one.

            For example, can I get a count of the number of s for each ? Are there any with more than one primary ? What are the most common db attributes of the primary Ids?

            Here's a query that shows my maximum level of XQuery sophistication at this point:

            ...

            ANSWER

            Answered 2021-Jun-06 at 17:58

            similar to my answer for https://www.biostars.org/p/280581/ using my tool xsltstream:

            Source https://stackoverflow.com/questions/67850041

            QUESTION

            JSONLD context for duplicate keys at nested level
            Asked 2021-Jun-04 at 08:51

            I have the following json merged with context below,

            Currently I am facing 2 problems

            1 the duplicate keys or properties that are present in the JSON at different levels how to deal with those so I can have the correct triples connected to each other?

            2 @vocab is ignored where I have use @id like on rowid and it adds a default prefix in json-ld playground

            ...

            ANSWER

            Answered 2021-Jun-02 at 17:39

            By "duplicate keys", I presume you mean the same term used as a property key at different levels of the JSON document. For this, JSON-LD has the notion of a Scoped Context, whereby you can have a context come into play inside of the value of some property, or where a type is in effect. In this way, for example, you could define "value" to map to one IRI at the top level, and within the term definition of "value" (or some other intervening property), define a new context which redefines the mapping for "value"

            Regarding @vocab and @id, @id is considered a document-relative term, and string values are expanded from the document base, or @base, if defined in the active context (see section 4.1.3 Base IRI). @vocab is used for expanding vocabulary-relative term such as @type and object property keys, which aren't otherwise defined as terms (see section 4.1.2 Default Vocabulary.

            Source https://stackoverflow.com/questions/67785924

            QUESTION

            Is it possible to implement it by OWL ontology?
            Asked 2021-Jun-02 at 16:18

            Could you please tell me, is it possible to implement such case by just OWL ontology definitions? Or I need to create custom rules for it?

            ...

            ANSWER

            Answered 2021-Jun-02 at 16:18

            Sure! The complicated part is probably how to best describe the relation of being replaced:

            Source https://stackoverflow.com/questions/67801754

            QUESTION

            How to write SPARQL query to fetch counts based on outer subject
            Asked 2021-Jun-01 at 17:10

            I am struggling to write a SPARQL query to fetch a list of products by the owner along with a count of other owners.

            following is the query i expect to get the result

            ...

            ANSWER

            Answered 2021-Jun-01 at 17:10

            SPARQL Query semantics specify how portions of the query are joined together. Your sub-query does not project any common variables that are shared with the outer query. It only SELECTs the ?allOwners variable which does not appear in the rest of the query.

            This means that you get a cross product of all the counts and all your other results; this is why you get duplicate rows and no correlations between the counts and rows.

            This kind of query can be achieved if you structure it correctly. Since you haven't provided example results you desire, I'm having to make a best guess of what you want. Something like the following may have the desired results:

            Source https://stackoverflow.com/questions/67757332

            QUESTION

            Convert in R a XML with ASCII Entity Names to a basic XML
            Asked 2021-May-30 at 21:50

            I have the following XML file:

            ...

            ANSWER

            Answered 2021-May-30 at 16:16

            The solution is a multi step process, extract the database node, convert to text, clean up and then convert back to xml with the read_xml() function.

            Source https://stackoverflow.com/questions/67762928

            QUESTION

            Double data type not working with RDF star query
            Asked 2021-May-30 at 17:14

            Apache Jena is not able to query RDF Star Triples that have a double data type in them. Here is the code for reproduction of the issue with Jena 3.17 (it can be reproduced on other versions too).

            ...

            ANSWER

            Answered 2021-May-30 at 17:14

            It works in Jena 4.0.0.

            In 3.17.0 - SPARQL was more like the original RDF* in its use of indexing.

            As a consequence, the non-canonical term map cause a problem.

            Try a lexical form of "1.0e0"^^xsd:double or v 4.x.x.

            Source https://stackoverflow.com/questions/67759806

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install RDF

            You can download it from GitHub.
            You can use RDF like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            gh repo clone qzhu2017/RDF

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