RGAN | generative adversarial networks | Machine Learning library

 by   ratschlab Python Version: Current License: MIT

kandi X-RAY | RGAN Summary

kandi X-RAY | RGAN Summary

RGAN is a Python library typically used in Artificial Intelligence, Machine Learning, Deep Learning, Pytorch, Tensorflow, Generative adversarial networks applications. RGAN has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can download it from GitHub.

Idea: Use generative adversarial networks (GANs) to generate real-valued time series, for medical purposes. As the title suggests. The GAN is RGAN because it uses recurrent neural networks for both encoder and decoder (specifically LSTMs). We aim to generate time series from ICU patients, using the open-access eICU dataset. However, we also generate some non-medical time-series, like sine waves and smooth functions sampled from Gaussian Processes, and MNIST digits (imagined as a time series). Sharing medical data is hard, because it comes from real people, and is naturally highly sensitive (not to mention legally protected). One workaround for this difficultly would be to create sufficiently realistic synthetic data. This synthetic data could then be used to reproducibly develop and train machine learning models, enabling better science, and ultimately better models for medicine. We claim in this paper, that synthetic data is useful when it can be used to train a model which can perform well on real data. So, we use the performance of a classifier trained on the synthetic data, then tested on real data as a measure of the quality of the data. We call this the "TSTR score". This is a way of evaluating the output of a GAN without relying on human perceptual judgements of individual samples. We also include the case where the GAN is trained in a differentially private manner, to provide stronger privacy guarantees for the training data. We mostly just use the differentially private SGD optimiser and the moments accountant from here (with some minor modifications).
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            kandi-support Support

              RGAN has a low active ecosystem.
              It has 588 star(s) with 175 fork(s). There are 38 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 21 open issues and 16 have been closed. On average issues are closed in 21 days. There are 1 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of RGAN is current.

            kandi-Quality Quality

              RGAN has 0 bugs and 0 code smells.

            kandi-Security Security

              RGAN has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              RGAN code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              RGAN is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              RGAN releases are not available. You will need to build from source code and install.
              Build file is available. You can build the component from source.
              Installation instructions, examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi has reviewed RGAN and discovered the below as its top functions. This is intended to give you an instant insight into RGAN implemented functionality, and help decide if they suit your requirements.
            • View marginalized marginal distribution
            • Displays the marginal marginal distribution of the data
            • Scale the data
            • Minimize the loss function
            • Sanitize x
            • Compute the sanitized gradients
            • Compute TSTRU
            • Define a tensorflow
            • Sample a trained model
            • Plot the trace of an experiment
            • Run TST on the given epoch
            • Get the training errors for a given epoch
            • Minimize the loss
            • Extract static information from the eICU
            • Splits the samples according to the given proportions
            • Load samples and labels from data
            • Argument parser
            • Memorise a TSTR experiment
            • Generate synthetic data
            • Generates a tensorflow
            • Split samples according to the given proportions
            • Runs the simulation
            • Train an epoch
            • Downsampling of a list of patient ids
            • Generate toy plot
            • Define discriminator
            • Save a MNIST plot
            • Transformer decoder
            Get all kandi verified functions for this library.

            RGAN Key Features

            No Key Features are available at this moment for RGAN.

            RGAN Examples and Code Snippets

            No Code Snippets are available at this moment for RGAN.

            Community Discussions

            QUESTION

            Tensorflow checkpoints are being overwritten
            Asked 2018-Oct-10 at 16:34

            I'm training a model (a generative adversarial network) over an input-set using Tensorflow, and I would like to save model's parameters every 50 epochs.

            Let say that I want to train the model for 1000 epochs, and save the model's parameters every 50 epoch, which would end up having 20 different checkpoint files.

            By having a Session, and a Saver object, I simply use the following code to do so.

            ...

            ANSWER

            Answered 2018-Oct-10 at 05:36

            tf.train.Saver has a max_to_keep argument that is set to 5 by default. You can pass 0 to keep all checkpoints:

            Source https://stackoverflow.com/questions/52732267

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install RGAN

            Primary dependencies: tensorflow, scipy, numpy, pandas.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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          • HTTPS

            https://github.com/ratschlab/RGAN.git

          • CLI

            gh repo clone ratschlab/RGAN

          • sshUrl

            git@github.com:ratschlab/RGAN.git

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