p53scan | p53scan & p63scan : search for the p53 or p63 motif

by simonvh Python Version: Current License: MIT

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | p53scan Summary

p53scan is a Python library. p53scan has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has low support. You can download it from GitHub.

p53scan (is an algorithm to locate p53 binding sites in DNA sequences. It is described by Smeenk et al. (manuscript in preparation).

Support

Quality

Security

License

Reuse

Support

p53scan has a low active ecosystem.

It has 1 star(s) with 1 fork(s). There are 1 watchers for this library.

It had no major release in the last 6 months.

p53scan has no issues reported. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of p53scan is current.

Quality

p53scan has 0 bugs and 0 code smells.

Security

p53scan has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

p53scan code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

p53scan is licensed under the MIT License. This license is Permissive.

Permissive licenses have the least restrictions, and you can use them in most projects.

Reuse

p53scan releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Installation instructions are available. Examples and code snippets are not available.

It has 1200 lines of code, 90 functions and 11 files.

It has high code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed p53scan and discovered the below as its top functions. This is intended to give you an instant insight into p53scan implemented functionality, and help decide if they suit your requirements.

Generate the body .
Read PWM from a PWM file .
sort the data
Reads a PWM file from the right site .
Scans the file .
Parses the FASTA file
Calculate the maximum score of each row .
Computes the minimum score of the pwm .
Set the label text .
Return the representation of the PWM .

Get all kandi verified functions for this library.

p53scan Key Features

No Key Features are available at this moment for p53scan.

p53scan Examples and Code Snippets

No Code Snippets are available at this moment for p53scan.

Community Discussions

No Community Discussions are available at this moment for p53scan.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install p53scan

To build and install p53scan on Linux: python setup.py build python setup.py install. To install p53scan on Windows: run p53scan-1.0.win32-py2.5.exe. For additional configuration see the documentation for Python Distutils.