bipy | Bipartite webs analysis using python | Machine Learning library
kandi X-RAY | bipy Summary
kandi X-RAY | bipy Summary
bipy is a collection of python scripts to analyze and visualize two-mode (bipartite) networks, mostly aimed at ecological datasets. bipy is released under the terms of the GNU GPL. Author : Timothee Poisot timothee.poisot@uqar.ca Language : Python 2.7 (although not tested, might work under 2.6) Requires : numpy, scipy, pyx, tempfile, urllib, networkx.
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Top functions reviewed by kandi - BETA
- Calculate the stochastics
- Compute the NODF value
- Calculate NSContrib - contrib
- Generate null contrib
- Read a web site from a remote URL
- Read a network from a text file
- Compute the generality of a weight matrix
- Fixes a matrix of species
- Open an ONN file
- Create a WW instance from a file
- Opens a bipartite
- Generate a plot of the web modules
- Multiply a list of vectors
- Compute the sensitivity score for each fit
- Calculates the PSD of a function
- Compute Shannon s entropy
- Computes the significance of a vector
- Calculate the Connectance
- R Compute the rank of a weight matrix
- Plot a basis matrix
- Load a bipartite matrix from a numpy array
bipy Key Features
bipy Examples and Code Snippets
Community Discussions
Trending Discussions on bipy
QUESTION
ANSWER
Answered 2021-May-14 at 10:08It looks like you're using this: https://github.com/tpoisot/bipy and that prova.py
is your addition (it would be nice if you include this kind of information in your question in future questions!)
The problem is that bipartite_class
is not a free-standing module, but is a part of the package bipy
. That means you need to import it from outside the package. You need to move prova.py
one directory up, to bipy-master
, and change its contents to:
Community Discussions, Code Snippets contain sources that include Stack Exchange Network
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Install bipy
You can use bipy like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.
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