FRETBursts | Burst analysis software for smFRET

by tritemio Python Version: 0.6.5 License: GPL-2.0

X-Ray Key Features Code Snippets Community Discussions Vulnerabilities Install Support

kandi X-RAY | FRETBursts Summary

FRETBursts is a Python library. FRETBursts has no bugs, it has no vulnerabilities, it has build file available, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

. [FRETBursts] is a open source software for burst analysis of freely-diffusing [single-molecule FRET] (smFRET) experiments.

Support

Quality

Security

License

Reuse

Support

FRETBursts has a low active ecosystem.

It has 16 star(s) with 11 fork(s). There are 4 watchers for this library.

It had no major release in the last 12 months.

There are 0 open issues and 48 have been closed. On average issues are closed in 171 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of FRETBursts is 0.6.5

Quality

FRETBursts has 0 bugs and 0 code smells.

Security

FRETBursts has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

FRETBursts code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

FRETBursts is licensed under the GPL-2.0 License. This license is Strong Copyleft.

Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

Reuse

FRETBursts releases are available to install and integrate.

Build file is available. You can build the component from source.

Installation instructions are available. Examples and code snippets are not available.

FRETBursts saves you 5126 person hours of effort in developing the same functionality from scratch.

It has 10777 lines of code, 779 functions and 64 files.

It has high code complexity. Code complexity directly impacts maintainability of the code.

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FRETBursts Key Features

No Key Features are available at this moment for FRETBursts.

FRETBursts Examples and Code Snippets

No Code Snippets are available at this moment for FRETBursts.

Community Discussions

No Community Discussions are available at this moment for FRETBursts.Refer to stack overflow page for discussions.

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install FRETBursts

Briefly, the installation requires installing a scientific python distribution (such as [Continuum Anaconda](https://store.continuum.io/cshop/anaconda/)) and then installing the fretbursts python package from the anaconda.org channel called tritemio.
[FRETBursts documentation: Getting started](http://fretbursts.readthedocs.org/en/latest/getting_started.html)
The official FRETBursts documentation is built and hosted by ReadTheDocs:.
[FRETBursts Documentation](http://fretbursts.readthedocs.org/)
[FRETBursts - us-ALEX smFRET burst analysis](http://nbviewer.ipython.org/urls/raw.github.com/tritemio/FRETBursts_notebooks/master/notebooks/FRETBursts%2520-%2520us-ALEX%2520smFRET%2520burst%2520analysis.ipynb) (start here)
[FRETBursts - 8-spot smFRET burst analysis](http://nbviewer.ipython.org/urls/raw.github.com/tritemio/FRETBursts_notebooks/master/notebooks/FRETBursts%2520-%25208-spot%2520smFRET%2520burst%2520analysis.ipynb)
[FRETBursts - ns-ALEX example](http://nbviewer.ipython.org/urls/raw.github.com/tritemio/FRETBursts_notebooks/master/notebooks/FRETBursts%20-%20ns-ALEX%20example.ipynb)
[Example - usALEX histogram](http://nbviewer.ipython.org/github/tritemio/FRETBursts_notebooks/blob/master/notebooks/Example%20-%20usALEX%20histogram.ipynb)
[Example - Working with timestamps and bursts](http://nbviewer.ipython.org/github/tritemio/FRETBursts_notebooks/blob/master/notebooks/Example%20-%20Working%20with%20timestamps%20and%20bursts.ipynb)
[Example - Burst Variance Analysis](http://nbviewer.jupyter.org/github/tritemio/FRETBursts_notebooks/blob/master/notebooks/Example%20-%20Burst%20Variance%20Analysis.ipynb)

Support

FRETBursts is open source and openly developed on GitHub. We encourage users to report issues or ask questions using the [GitHub Issue](https://github.com/OpenSMFS/FRETBursts/issues?state=open). In the open source spirit, contributions are welcome and managed using [GitHub Pull Request](https://help.github.com/articles/creating-a-pull-request). Any level of contribution is accepted, from fixing typos, improving the docs (most editing can be done online directly) or implementing new features (see [github help page](https://help.github.com/articles/fork-a-repo/)). For questions on how to contribute please open a [GitHub Issue](https://github.com/OpenSMFS/FRETBursts/issues?state=open).

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