peds2019 | antibody sequences using long short-term memory networks | Regex library

 by   vkola-lab Python Version: Current License: MIT

kandi X-RAY | peds2019 Summary

kandi X-RAY | peds2019 Summary

peds2019 is a Python library typically used in Utilities, Regex, Neural Network applications. peds2019 has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However peds2019 build file is not available. You can download it from GitHub.

Quantifying the nativeness of antibody sequences using long short-term memory networks
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            kandi-support Support

              peds2019 has a low active ecosystem.
              It has 6 star(s) with 3 fork(s). There are 3 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              There are 1 open issues and 4 have been closed. On average issues are closed in 54 days. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of peds2019 is current.

            kandi-Quality Quality

              peds2019 has no bugs reported.

            kandi-Security Security

              peds2019 has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              peds2019 is licensed under the MIT License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              peds2019 releases are not available. You will need to build from source code and install.
              peds2019 has no build file. You will be need to create the build yourself to build the component from source.
              Installation instructions, examples and code snippets are available.

            Top functions reviewed by kandi - BETA

            kandi has reviewed peds2019 and discovered the below as its top functions. This is intended to give you an instant insight into peds2019 implemented functionality, and help decide if they suit your requirements.
            • Fit the model
            • Evaluate a sequence
            • Get a dictionary of parameters
            • Saves the model to fn
            • Forward vlen
            • Connect to a device
            • Load a numpy array from a file
            • Set the parameters
            • Forward LSTM
            • Load a configuration file
            Get all kandi verified functions for this library.

            peds2019 Key Features

            No Key Features are available at this moment for peds2019.

            peds2019 Examples and Code Snippets

            No Code Snippets are available at this moment for peds2019.

            Community Discussions

            QUESTION

            How would I match `.scss`, `.sass`, `.css` but not `.ass`? (RegExp)
            Asked 2022-Mar-02 at 15:18

            I have the following regex: /\.([s]?[ac]ss)$/. The problem is, it matches .scss, .sass, .css, .ass. How would I make it not match .ass?

            ...

            ANSWER

            Answered 2022-Mar-02 at 08:35

            QUESTION

            REGEX for matching number with two and three numbered patterns together
            Asked 2022-Jan-17 at 10:25

            I have an array of 5 numbers, I'd like to match as long as there are three of the same number and two of the same different number in the array, placement does not matter. Number sequences can be any random string of 5 numbers between 1 - 5. Examples of matches would be: 33322 24422 52225 44111 54545 *basically any grouping of 2 and 3 of the same numbers needs to match.

            Best I've come up with so far: ^([0-9])\1{2}|([0-9])\1{1}$

            I am not so good with regex, any help would be greatly appreciated.

            ...

            ANSWER

            Answered 2022-Jan-16 at 23:38

            QUESTION

            Is there a better way to clean a string?
            Asked 2022-Jan-06 at 09:49

            Currently, this is my code.

            ...

            ANSWER

            Answered 2022-Jan-06 at 04:57

            A simple solution would be to convert all characters to lowercase, replace any character that isn't a-z, 0-9, or a space with a space character, and then replace multiple space characters with a single space character.

            Source https://stackoverflow.com/questions/70602532

            QUESTION

            Complex string manipulation by JavaScript regexp
            Asked 2021-Dec-17 at 14:24

            I am generating some meaningful name with the following rule in a JavaScript/Node JS program:

            Input: "tenancy_account__accountPublicId__workspace__workspacePublicId__remove-user__userPublicId"

            Expected output: "TenancyAccountAccountPublicIdWorkspaceWorkspacePublicIdRemove-userUserPublicId"

            Rules:

            1. replace any character with zero or more underscore to the non-underscored uppercase Example:x | __*x => X
            2. If exists remove last _

            This is what is tried so far, looking for better alternatives, if any:

            ...

            ANSWER

            Answered 2021-Dec-17 at 14:21

            QUESTION

            Difference between Pattern.asMatchPredicate and Pattern.asPredicate
            Asked 2021-Nov-16 at 14:57

            Java 11 added some new methods to the Pattern class (a compiled version of a regular expression), including:

            I am trying to understand the difference between the two and when I would want to use one over the other?

            ...

            ANSWER

            Answered 2021-Nov-16 at 14:57
            • Pattern.asPredicate will return true if any part of the input string matches the Regular expression. You should use this method if you're testing some larger body of text for a certain pattern. For example, to test whether a comment from a user contains a hyperlink.
            • Pattern.asMatchPredicate will return true if the entire input string matches the Regular expression. You should use this method if you're testing the entire input for a certain pattern. For example, to validate the phone number of a user in their profile.

            Pattern.asPredicate internally uses Matcher.find(), while Pattern.asMatchPrediate internally uses Matcher.matches(). So the difference between the two boils down to the difference between these two methods from the Matcher class.

            Below are some examples to showcase the difference. You can copy & paste below code in an online Java sandbox like https://www.compilejava.net/ to play around with it yourself.

            Source https://stackoverflow.com/questions/69981170

            QUESTION

            Regex to replace single occurrence of character in C++ with another character
            Asked 2021-Nov-13 at 13:13

            I am trying to replace a single occurrence of a character '1' in a String with a different character.

            This same character can occur multiple times in the String which I am not interested in.

            For example, in the below string I want to replace the single occurrence of 1 with 2.

            ...

            ANSWER

            Answered 2021-Nov-13 at 09:22

            Use a negative lookahead in the regexp to match a 1 that isn't followed by another 1:

            Source https://stackoverflow.com/questions/69952780

            QUESTION

            Negating bracketed character classes in Perl regular expressions and grep
            Asked 2021-Nov-02 at 23:48

            I'm attempting to solve a very simple problem - find strings in an array which only contain certain letters. However, I've run up against something in the behavior of regular expressions and/or grep that I don't get.

            ...

            ANSWER

            Answered 2021-Nov-02 at 13:15

            Both fails are fixed with the addition of anchors ^ and $ and quantifier +

            These both work:

            Source https://stackoverflow.com/questions/69801030

            QUESTION

            Regular expression that matches all specified characters in any order at the start of the line
            Asked 2021-Oct-31 at 11:30

            I'm looking for a regexp that matches any line that contains 'B', 'R', 'A' and 'S' (in any order) at the start. It would match all the following lines, except the last two.

            ...

            ANSWER

            Answered 2021-Oct-30 at 21:05

            There are only 24 permutations :)

            Source https://stackoverflow.com/questions/69781982

            QUESTION

            Using PowerShell how to replace and save a value in a json file having comments
            Asked 2021-Oct-22 at 22:32

            I have a Json file having multiple comments and I want to replace a value in it.

            I tried the below and it gives me a json file without comments. But I don't understand how to change the value and save it back with comments. Is this even possible because we are replacing all the comments with empty lines?

            ...

            ANSWER

            Answered 2021-Oct-22 at 22:32

            QUESTION

            How to get customed tags in a text, and put in another text?
            Asked 2021-Oct-04 at 15:01

            The header question may not be easy to understand. Hope you can understand my detailed info below.

            I have sentence data below, that has some tags, represented by [tn]tag[/tn]:

            ...

            ANSWER

            Answered 2021-Oct-04 at 08:47

            Here is a solution that assumes that there are no nested tags, that all tags open and close in the part. Also, this assumes that all characters from the sentence are in parts. For this last assumption, I had to add the . after it has to be in the second expected part. I also had to remove newline characters from the sentence but I think it was because of the copy/paste. This solution will loop through all characters and store two parallel buffers : one with the tags, one without. We will use the second one to compare with the parts, and use the first one to generate the output.

            Source https://stackoverflow.com/questions/69432894

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install peds2019

            These instructions will get you a copy of the project up and running on your local machine for development and testing purposes.
            This is a lightweight project targeting the problem related to quantifying the nativeness of antibody sequences and therefore, no sophisticated installation routine is required. All you need is to place it into your project repository and import at need. If you want to put it somewhere else, please check out importlib.util module for more flexible import capability.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            CLONE
          • HTTPS

            https://github.com/vkola-lab/peds2019.git

          • CLI

            gh repo clone vkola-lab/peds2019

          • sshUrl

            git@github.com:vkola-lab/peds2019.git

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