facets | implement Fraction and Copy number Estimate
kandi X-RAY | facets Summary
kandi X-RAY | facets Summary
Algorithm to implement Fraction and Allele specific Copy number Estimate from Tumor/normal Sequencing. Travis CI (Linux & macOS) Test coverage. You can install the current version (along with the vignette) using the command. pctGCdata is a required package. So install that also (needs to be done only once). If you get an error message about pctGCdata use.
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QUESTION
I would like to add some curves to a ggplot with facets but I can not figure out how to correctly identify a particular panel with a particular name used for faceting. For instance:
...ANSWER
Answered 2021-Jun-13 at 22:05We could extract the data.frame
in layout
QUESTION
Q-Q plot is a useful graphical device used to check for example normality of residuals. Q-Q plot is constructed by putting theoretical quantiles on x-axis and observed quantiles on the y-axis. In ggplot, this can be easily done using geom_qq and stat_qq. I would like to produce a wormplot, which is like a Q-Q plot, but on the y-axis, it has a difference between theoretical and observed quantiles (see the figure).
Is there a way to do this in ggplot? For example, is there a simple way to change the y-axis of the geom_qq to show the difference between theoretical and observed quantiles? I know it should be possible to calculate observed quantiles manually, but this would not work well if I would like to create plots of multiple groups or using facets, since then I would also need to calculate the observed quantiles manually for each group separately.
...ANSWER
Answered 2021-Jun-13 at 20:42blogpost mentioned in comments contains a guide to code your own statfunctions to create such plots yourself
Otherwise, library qqplotr https://aloy.github.io/qqplotr/index.html contains an option detrend=True
which basically produce wormplots with accompanying confidence bands.
If you want lines, and not a band, just do fill=NA, color='black', size=0.5
QUESTION
I'm working with house price indices and I have a question on how to add another geom to a ggplot. This is an example data that I made for this question. I have housing data from a census and from online postings. rooms a variable for a housing characteristic (many or few rooms), and value is the percentage of homes for each source that has that characteristic. Then, houses and apts show the percentage of houses and apts that the city has for that data source. So for example, city 1 has 40% houses and 60% apartments in the census data and 45% houses and 55% apartments in the zillow data. I made a geom_bar faceting by rooms and filling by source so I have two plots, one for rooms=1 and another for rooms=2, each one of them with two bars for each city (one for each source). Now, I want to fill those same bars with the percentage of houses and apartments for each city and source.
I'd be very grateful if someone can help me with this.
The code I'm currently using for the plot is the following:
...ANSWER
Answered 2021-Jun-09 at 21:24If I understand correctly, you're looking to kind of separate out and show in one plot the differentiation of:
- City
- Rooms
- Value (the length of the bar here)
- % houses or % apts (one is the inverse of the other, so basically just showing the same thing)
If I have that correct, perhaps the simplest way is to just facet across two variables instead of one using facet_grid()
:
QUESTION
The plot code below makes the segment line congverge at the center of the descrete x variable for all colours. What can be done so that the segment line is vertical for each x variable respective of colour?
...ANSWER
Answered 2021-Jun-07 at 11:26position_dodge()
can't handle xend
and yend
. Use geom_line()
or geom_linerange()
instead:
QUESTION
I have made a plot displaying multiple facets of my data. The colour bar created by scale_colour_gradientn
is confusing because it shows percentage breakdowns. Could I get rid of these percentage breakdowns and add my own. I have tried using values
and breaks
parameters but with no luck. I think maybe ggplot
is confused because most of the values are either very small or close to 1. I have added a toy dataset, code and image output below.
dput(df)
...ANSWER
Answered 2021-Jun-03 at 14:45Because your Adj.P.value
is numeric, you have to break it into categories first.
QUESTION
I need to get the email address from this 'facets' table I created from my firehose logs (JSON).
Now, I am using Athena to get particular information.
I need to get the email addresses from this:
This is my out of 'facets' when I pass-
...ANSWER
Answered 2021-Jun-03 at 13:51Assuming you have one column which stores json in provided format you can use json_extract
with needed paths (and maybe some casts):
QUESTION
I have stucked with an issue using refinement list widget of algolia. First of all my resulting data structure is like that:
...ANSWER
Answered 2021-Jun-03 at 11:43Problem was in Dashboard of Algolia. When we clicked on 'searchable' instead of 'filter only' radiobutton for chosen attributeForFaceting - everything starts working good.
QUESTION
I've created a new SOLR Indexed property that must act as category a facet:
...ANSWER
Answered 2021-May-28 at 07:17If all the products in the result have the same value or no value at all, the facet won't show. The facet will only appear if it will make a difference in the result when the user filters by it. Can you check if that's the case?
QUESTION
Im currently getting back into using R, but its been a while so im a little rusty.
I have the following code for making plots using ggplot2:
...ANSWER
Answered 2021-May-25 at 22:44If you want to use one color shade for each range of values, you can create a grouping (factor) column with levels on the condition of PAH16Cons
values <100, 100-500, or >500. Afterwards, use this column for the color
aesthetics in the ggplot
and use scale_color_manual(values=c("green", "yellow", "red"))
to customize the color.
QUESTION
ANSWER
Answered 2021-May-25 at 09:05You can use position=position_dodge(0.9)
like the following code
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