gggenes | ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2 | Data Visualization library

by wilkox R Version: v0.3.1 License: No License

X-Ray Key Features Code Snippets Community Discussions(2)Vulnerabilities Install Support

kandi X-RAY | gggenes Summary

gggenes is a R library typically used in Analytics, Data Visualization applications. gggenes has no bugs, it has no vulnerabilities and it has low support. You can download it from GitHub.

gggenes is a ggplot2 extension for drawing gene arrow maps.

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Quality

Security

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Support

gggenes has a low active ecosystem.

It has 344 star(s) with 46 fork(s). There are 5 watchers for this library.

It had no major release in the last 6 months.

There are 16 open issues and 37 have been closed. On average issues are closed in 16 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of gggenes is v0.3.1

Quality

gggenes has 0 bugs and 0 code smells.

Security

gggenes has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

gggenes code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

gggenes does not have a standard license declared.

Check the repository for any license declaration and review the terms closely.

Without a license, all rights are reserved, and you cannot use the library in your applications.

Reuse

gggenes releases are not available. You will need to build from source code and install.

Installation instructions are not available. Examples and code snippets are available.

It has 2809 lines of code, 0 functions and 24 files.

It has low code complexity. Code complexity directly impacts maintainability of the code.

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gggenes Key Features

No Key Features are available at this moment for gggenes.

gggenes Examples and Code Snippets

No Code Snippets are available at this moment for gggenes.

Community Discussions

Trending Discussions on gggenes

Tibble reversing coordinates

How do I colour genes in groups and have gene labels above the arrows in ggplot2?

QUESTION

Tibble reversing coordinates

Asked 2020-Aug-19 at 15:13

I'm trying to do an operation which a prior seem simple but I'm didn't find an explicit solution on the web.

I got this kind of table:

...

ANSWER

Answered 2020-Aug-19 at 15:13

I solved, quite dumb, probably there is some better solution?

Source https://stackoverflow.com/questions/63476981

QUESTION

How do I colour genes in groups and have gene labels above the arrows in ggplot2?

Asked 2020-Jan-29 at 01:08

I am using R for the first time. I'm trying to use ggplot2 to make an arrow genome map and I am having trouble with a few of the details. Here is a snippet of the data:

...

ANSWER

Answered 2020-Jan-29 at 01:08

1) To label your genes according to the color you want (and set in the column "color"), you can pass it in the argument fill of the aes and then use scale_fill_identity().

2) To place the gene label above, you can set y to 1.05 in geom_gene_label, however, I noticed that the size of label is not consistent (cyp142 is smaller than others). So, you can replace geom_gene_label by geom_text and calculate the x position of each to place them in the middle of their corresponding arrows.

Altogether, you can write something like that:

Source https://stackoverflow.com/questions/59958320

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install gggenes

You can download it from GitHub.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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