Dynamical systems methods for RNA velocity analysis
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Using combined evidence from replicates to evaluate ChIP-seq peaks
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biological-architecture-primerby francisglee
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BMI219-2017-ProteinFoldingby pfnet-research
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License: No License (No License)UCSF BMI219 Deep Learning (2017), Coding example (Prediction of protein folding with RNN and CNN)
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hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society (HGVS) syntax.
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waka waka
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An android chatbot that analyzes your medical symptoms
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Example on how to use pre trained networks on new classification problems.
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An EEG Simmulator for Computational NeuroScience
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Simple Python webservice to provide the latest statistics about Coronavirus COVID-19 in JSON format.
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Biomedical Event Extraction on CORD-19
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Detects hotspot regions for somatic mutations in 3D protein structures
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PHOsphoproteomic dissecTiOn using Networks
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Biomedical-Segmentation-with-PyTorchby SleyAI
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License: No License (No License)Biomedical Segmentation with PyTorch and different Convolutional Neural Network Architectures.
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Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:
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Predict MLST directly from uncorrected long reads
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User-friendly software for viewing and processing Sanger DNA sequencing trace files.
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vSNP -- validate SNPs
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Multimodal-autoencoder-for-breast-cancerby rezacsedu
Python 14 Version:Current License: No License (No License)
License: No License (No License)Prognostically Relevant Subtypes and Survival Prediction for Breast Cancer Based on Multimodal Genomics Data
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Variational autoencoders for cancer data integration
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:pill: Simple medication reminder for an oblivious friend.
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B-cell repertoire and clonal family tree explorer
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AHRQ-CDS-Connect-PAIN-MANAGEMENT-SUMMARYby AHRQ-CDS
JavaScript 14 Version:Current License: Permissive (Apache-2.0)
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AccuSyn: An Accurate Web-based Genome Synteny Browser
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Heart-Disease-Predictionby ashutoshtanwar1
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License: No License (No License)This Machine Learning model helps in predicting the Heart diseases.
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A deep learning model to predict anticancer peptides.
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Whole genome focused array SNP typer
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CAVA (Clinical Annotation of VAriants)
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Feature extraction algorithm for genomic data
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A package for detecting epistasis by machine learning
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Web crawler for DermNet (http://www.dermnet.com/) - one of the greatest data resources for skin diseases.
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Kaggle Competitions: Find the nuclei in divergent images to advance medical discovery
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DeepProfile framework, which learns a variational autoencoder (VAE) network from a vast quantity of publicly available gene expression samples and uses the learned network to encode a low-dimensional representation (LDR) for predicting complex phenotypes
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Covid-19 Virus 🦠 App 📱 using Dagger Hilt, Coroutines, ViewModel, Lifecycle, LiveData, Retrofit based on MVVM Architecture. 🛠
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Mixed Model Package For Genome-wide association mapping.
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This repository provides users with a framework to store, search and visualize biological data.
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SigProfilerSimulator allows realistic simulations of mutational patterns and mutational signatures in cancer genomes. The tool can be used to simulate signatures of single point mutations, double point mutations, and insertion/deletions. Further, the tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
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Retinal-Disease-Diagnosis-With-Residual-Attention-Networksby deontaepharr
Python 13 Version:Current License: No License (No License)
License: No License (No License)Using Residual Attention Networks to diagnose retinal diseases in medical images
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SPVec: A Word2vec-inspired feature representation method for Drug-Target Interaction Prediction
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Human segmentation project(pytorch)
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Alerts you of people who allegedly assaulted others as you browse FetLife. Sister tools exist for Facebook (https://apps.facebook.com/predator-alert-tool/) and for OkCupid (http://www.onthemedia.org/story/predator-alert-ok-cupid/)
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a comparative genome browser for bacteriophages
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velodynby calico
Dynamical systems methods for RNA velocity analysis
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MSPCby Genometric
Using combined evidence from replicates to evaluate ChIP-seq peaks
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apple-receiptby shoshins
Apple InAppPurchase Receipt - Models, Parser, Validator
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LSTM-CNN-model-for-HARby lingjuanlv
LSTM-CNN model for Human Activity Recognition
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biological-architecture-primerby francisglee
Just some light reading.
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BMI219-2017-ProteinFoldingby pfnet-research
UCSF BMI219 Deep Learning (2017), Coding example (Prediction of protein folding with RNN and CNN)
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hgvslibby personalis
hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society (HGVS) syntax.
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android-medical-assistantby zemahran
An android chatbot that analyzes your medical symptoms
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pre-trained-keras-exampleby innolitics
Example on how to use pre trained networks on new classification problems.
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eeg_simulatorby kebab-mai-haddi
An EEG Simmulator for Computational NeuroScience
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covid19-webserviceby mahmoudadel2
Simple Python webservice to provide the latest statistics about Coronavirus COVID-19 in JSON format.
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CORD19-BioMed-Event-Extractionby PlusLabNLP
Biomedical Event Extraction on CORD-19
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HotMAPSby KarchinLab
Detects hotspot regions for somatic mutations in 3D protein structures
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photonby jdrudolph
PHOsphoproteomic dissecTiOn using Networks
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Biomedical-Segmentation-with-PyTorchby SleyAI
Biomedical Segmentation with PyTorch and different Convolutional Neural Network Architectures.
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DigitalCellSorterby sdomanskyi
Digital Cell Sorter (DCS): single cell RNA-seq analysis toolkit. Documentation:
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krocusby andrewjpage
Predict MLST directly from uncorrected long reads
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seqtraceby stuckyb
User-friendly software for viewing and processing Sanger DNA sequencing trace files.
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genetics-gold-standardsby opentargets
GWAS gold standards repository
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Multimodal-autoencoder-for-breast-cancerby rezacsedu
Prognostically Relevant Subtypes and Survival Prediction for Breast Cancer Based on Multimodal Genomics Data
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IntegrativeVAEsby CancerAI-CL
Variational autoencoders for cancer data integration
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hl7-argonaut-fhirby clinical-meteor
HL7 Argonaut FHIR project for Clinical Meteor
JavaScript 14Updated: 4 y ago License: Permissive (MIT)
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rcvr-apiby railslove
Recover Cologne Api, kneipen kontakt tracer. recover provides localities a privacy-compliant, safe, and easy way for their guests to check in. See https://www.recoverapp.de/ for more details.
Ruby 14Updated: 4 y ago License: Strong Copyleft (AGPL-3.0)
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pilloby KayvanMazaheri
:pill: Simple medication reminder for an oblivious friend.
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olmstedby matsengrp
B-cell repertoire and clonal family tree explorer
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Tesseract-MIby Tesseract-MI
Open-Source Browser-based Platform for Artificial Intelligence Deployment in Medical Imaging
JavaScript 14Updated: 4 y ago License: Permissive (MIT)
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AHRQ-CDS-Connect-PAIN-MANAGEMENT-SUMMARYby AHRQ-CDS
The AHRQ CDS Pain Management Summary tool is part of the CDS Connect project https://cds.ahrq.gov/, sponsored by the Agency for Healthcare Research and Quality (AHRQ), and developed under contract with AHRQ by MITRE's CAMH FFRDC. The CDS Pain Management Summary tool is a SMART on FHIR dashboard for managing pain.
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accusynby jorgenunezsiri
AccuSyn: An Accurate Web-based Genome Synteny Browser
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flameby apigee
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Heart-Disease-Predictionby ashutoshtanwar1
This Machine Learning model helps in predicting the Heart diseases.
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ACP-DLby haichengyi
A deep learning model to predict anticancer peptides.
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wgfastby jasonsahl
Whole genome focused array SNP typer
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CAVAby RahmanTeam
CAVA (Clinical Annotation of VAriants)
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gene-oracleby SystemsGenetics
Feature extraction algorithm for genomic data
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GenEpiby Chester75321
A package for detecting epistasis by machine learning
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DermNet-images-crawlerby tcxxxx
Web crawler for DermNet (http://www.dermnet.com/) - one of the greatest data resources for skin diseases.
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2018-Data-Science-Bowlby ace19-dev
Kaggle Competitions: Find the nuclei in divergent images to advance medical discovery
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DeepProfileby suinleelab
DeepProfile framework, which learns a variational autoencoder (VAE) network from a vast quantity of publicly available gene expression samples and uses the learned network to encode a low-dimensional representation (LDR) for predicting complex phenotypes
Python 13Updated: 4 y ago License: No License (No License)
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Covid19Statsby halilozel1903
Covid-19 Virus 🦠 App 📱 using Dagger Hilt, Coroutines, ViewModel, Lifecycle, LiveData, Retrofit based on MVVM Architecture. 🛠
Kotlin 13Updated: 2 y ago License: No License (No License)
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mixmogamby bvilhjal
Mixed Model Package For Genome-wide association mapping.
Python 13Updated: 4 y ago License: Permissive (MIT)
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machadoby lmb-embrapa
This repository provides users with a framework to store, search and visualize biological data.
Python 13Updated: 4 y ago License: Strong Copyleft (GPL-3.0)
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SigProfilerSimulatorby AlexandrovLab
SigProfilerSimulator allows realistic simulations of mutational patterns and mutational signatures in cancer genomes. The tool can be used to simulate signatures of single point mutations, double point mutations, and insertion/deletions. Further, the tool makes use of SigProfilerMatrixGenerator and SigProfilerPlotting.
Python 13Updated: 4 y ago License: Permissive (BSD-2-Clause)
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Retinal-Disease-Diagnosis-With-Residual-Attention-Networksby deontaepharr
Using Residual Attention Networks to diagnose retinal diseases in medical images
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SPVecby dqwei-lab
SPVec: A Word2vec-inspired feature representation method for Drug-Target Interaction Prediction
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humanseg.pytorchby cavalleria
Human segmentation project(pytorch)
Python 13Updated: 4 y ago License: Permissive (MIT)
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fetlife-faadeby fabacab
Alerts you of people who allegedly assaulted others as you browse FetLife. Sister tools exist for Facebook (https://apps.facebook.com/predator-alert-tool/) and for OkCupid (http://www.onthemedia.org/story/predator-alert-ok-cupid/)
JavaScript 13Updated: 5 y ago License: No License (No License)
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phameratorby scresawn
a comparative genome browser for bacteriophages
JavaScript 13Updated: 4 y ago License: Strong Copyleft (GPL-3.0)
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