perfplot | create performance and roofline plots | Performance Testing library
kandi X-RAY | perfplot Summary
kandi X-RAY | perfplot Summary
Perfplot is a collection of scripts and tools that allow a user to instrument performance counters on a recent Intel platform, measure them and use the results to generate roofline and performance plots.
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Trending Discussions on perfplot
QUESTION
I have a written a c-extension for the numpy library which is used for computing a specific type of bincount. From the lack of a better name, let's call it fast_compiled
and place the method signature in numpy/core/src/multiarray/multiarraymodule.c inside array_module_methods
:
ANSWER
Answered 2021-Jun-01 at 14:18fast_compiled
is faster than fast_compiled_strides
because it works on contiguous data known at compile time enabling compilers to use SIMD instructions (eg. typically SSE on x86-like platforms or NEON on ARM ones). It should also be faster because of less data cache to retrieve from the L1 cache (more fetches are needed due to the indirection).
Indeed, dans[j] += weights[k]
can be vectorized by loading m
items of dans
and m
items of weights
adding the m
items using one instruction and storing the m
items back in dans
. This solution is efficient and cache friendly.
dans[strides[i]] += weights[i]
cannot be efficiently vectorized on most mainstream hardware. The processor need to perform a costly gather from the memory hierarchy due to the indirection, then do the sum and then perform a scatter store which is also expensive. Even if strides
would contain contiguous indices, the instructions are generally much more expensive than loading a contiguous block of data from memory. Moreover, compiler often fail to vectorize the code or just find that this is not worth using SIMD instruction in that case. As a result the generated code is likely a less efficient scalar code.
Actually, the performance difference between the two codes should be bigger on modern processors with good compilation flags. I suspect you only use SSE on a x86 processor here and so the speed up is close to 2 theoretically since 2 double-precision floating-point numbers can be computed in a row. However, using AVX/AVX-2 would lead to a speed up close to 4 theoretically (as 4 numbers can be computed in a row). Very recent Intel processors can even compute 8 double-precision floating-point numbers in a row. Note that computing simple-precision floating-point numbers can also results in a theoretical 2x speed up. The same apply for other architecture like ARM with NEON and SVE instruction sets or POWER. Since future processors will likely use wider SIMD registers (because of their efficiency), it is very important to write SIMD-friendly codes.
QUESTION
I'm working with the perfplot
library (which you can pip-install) which benchmarks functions and plots their performance.
When observing the plotted graphs, the labels are truncated. How can I prevent this?
Here's a simple MCVE:
...ANSWER
Answered 2020-Dec-26 at 13:31perfplot
seems to use matplotlib for the display. According to the github site, you can separate calculation and plotting, giving you the possibility to inject an autoformat (basically plt.tight_layout()
) with rcParams for this graph.
You can add the following before your script:
QUESTION
After a search on SO for numpy array mixed dtype filling I found a nice little numpy array fill performance tester perfplot
. When the posted code answer from Nico Schlömer was ran, I saw a dip in the performance chart. So I changed the perflot.show(..snippet..)
to perflot.bench(..snippet..)
as suggest here and got the following error:
...
ANSWER
Answered 2020-Jan-15 at 23:56After a dive into perfplot main.py
I figured out there is no logx'
and logy
**kwargs available.
My solution:
QUESTION
I want to generate a hash table for a given string or given list. The hash table treat element as key
and showup times as value
. For instance:
ANSWER
Answered 2020-Feb-11 at 13:03The best way would be to use the built in counter, otherwise, you may use defualtdict which is quite similar to your second attempt
QUESTION
Numpy offers vectorize
and frompyfunc
with similar functionalies.
As pointed out in this SO-post, vectorize
wraps frompyfunc
and handles the type of the returned array correctly, while frompyfunc
returns an array of np.object
.
However, frompyfunc
outperforms vectorize
consistently by 10-20% for all sizes, which can also not be explained with different return types.
Consider the following variants:
...ANSWER
Answered 2019-Jul-29 at 21:39Following the hints of @hpaulj we can profile the vectorize
-function:
QUESTION
I am using perpflot library to test the effect of DatetimeIndex
on searching for a pandas dataframe.
I have defined a setup function to cretate 2 dataframes. One with datetime index and other with time as a column. I have also defined 2 functions which uses .loc
in index and on column respectively and returns the subdata. However, it shows me a typeError
.
ANSWER
Answered 2019-Jun-21 at 20:49The bench()
and show()
methods by default compare the kernel outputs to ensure that all the methods produce the same output (for correctness). The check is done using numpy functions which may not apply to all cases or all kernel outputs.
What you want to do is specify an equality_check
argument, which allows some flexibility in how the output is compared. This is especially useful when comparing things such as iterables of strings or dictionaries, which numpy
cannot handle well.
Set equality_check
to None if you're confident your functions are correct, or otherwise pass some callable which implements your own checking logic.
QUESTION
I am trying to benchmark the performance of dask
vs pandas
.
ANSWER
Answered 2018-Sep-05 at 12:09The chunks
keyword is short for chunksize, not number of chunks
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