tetgen | Python interface to the C++ TetGen library to generate | Service Mesh library
kandi X-RAY | tetgen Summary
kandi X-RAY | tetgen Summary
A Python interface to the C++ TetGen library to generate tetrahedral meshes of any 3D polyhedral domains
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QUESTION
I'm a wee bit stuck.
I have a 3D point cloud (an array of (n,3) vertices), in which I am trying to generate a 3D triangular mesh from. So far I have had no luck.
The format my data comes in:
- (x,y) values in regularly spaced (z) intervals. Think of the data as closed loop planar contours stored slice by slice in the z direction.
- The vertices in my data must be absolute positions for the mesh triangles (i.e. I don't want them to be smoothed out such that the volume begins to change shape, but linear interpolation between the layers is fine).
Illustration:
...ANSWER
Answered 2020-Sep-04 at 06:49Actually there are two ways of having meshlab functionality in python:
- The first is MeshLabXML (https://github.com/3DLIRIOUS/MeshLabXML ) a third party, is a Python scripting interface to meshlab scripting interface
- the second is PyMeshLab (https://github.com/cnr-isti-vclab/PyMeshLab ) an ongoing effort done by the MeshLab authors, (currently in alpha stage) to have a direct Python bindings to all the meshlab filters
QUESTION
I am using tetgen to generate meshes for my research.
My models have empty internal chambers inside them. For example, an empty box of size (5,5,5) inside a box of size (10, 10, 10). See image:
The problem is that tetgen generates tetrahedrons inside the empty chamber. Why? Is there a way to avoid it?
I tried using -YY, -q, -CC, -c, and their combinations, but all had the same problem, and did not give insight on the error. (http://wias-berlin.de/software/tetgen/1.5/doc/manual/manual005.html).
...ANSWER
Answered 2017-Nov-10 at 21:04The way I solved it was to create a .poly file (http://wias-berlin.de/software/tetgen/fformats.poly.html). I created a .poly file from a .off file (https://en.wikipedia.org/wiki/OFF_(file_format)), which I could export from OpenScad.
.poly file has 4 parts, from which the 3rd specifies holes in the object. You need to tell TetGen where you have holes in the object. The way to do it, is by specifying one point in the hole/chamber.
A possible .poly file would look like this:
part1 - vertices:
QUESTION
I had asked this question before but on github here , but never got farther into it. Now I have picked it up, and am trying to get this mesh tetrahedralized, but I keep getting errors see below. Ahlthough the statement clearly says "Found a segment and a subface intersect", I don't know how would I go about resolving that ? The question here is more precisely how to find if mesh has an open boundary and how to locate that and fix that in perhaps blender ? I am asking about open boundary since "camel.off" which clearly has an open boundary gives the same error. I even tried using another geometry processing tool but it showed no holes found, and its auto repair didn't work either. I get the obj file of Emily 3D scan and remove everything such as eye lashes, eyeballs, inner and outer extra subgeometries. I am using blender to export and using libigl tetgen example to see it if it works. I inspected the mesh, I don't see any holes in the topology, the base hole I fill up using the blender grid fill functionality. See the attached picture. In libigl I launched it in the viewer before processing with tetgen and it looks fine, I also tried all the blender clean up tool, see .
Is there a way to do some more preprocessing automatically before trying to create a tetrahedralized mesh that would ensure smooth operation ? Please advice.
...ANSWER
Answered 2018-Oct-22 at 17:48Notice that the lips of Emily has self-intersecting faces. This can be viewed in MeshLab as suggested by @Dominik Mokris. However after deleting those faces, it is hard to get it properly filled without additional faces becoming self-intersecting. See one of the main errors from the tetgen was about self-intersection. The only great tool I found is MeshMixer from Autodesk, in it there is tool called makesolid that takes care of closing the holes and self intersecting faces, etc. Great tool, I can now generate tetgen nicely using libigl !
QUESTION
I am editing a CMakeLists.txt file made by someone else. I'm trying to get rid of some of the warnings generated when compiling the project.
Normally I just add set( CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${MY_FLAGS}")
with whatever flags I need to add, and it works fine, but for this project, it's just not working. The warnings still appear. I tried a couple alternative methods, but nothing.
What could be causing the issue?
...ANSWER
Answered 2018-Oct-06 at 14:43You are adding the flags at the end, after scanning the subfolder, you have to first set the flags and then go through your subfolders.
QUESTION
Qt Creator Nothing happen when call a static library from an application. I have these line of codes as my main.cpp main app file:
...ANSWER
Answered 2017-Dec-09 at 17:02Your main
in main.cpp should be:
QUESTION
I have to compile a source code to get the executables. However, the make command fails to compile due to the presence of a parantheses with the following error message:
...ANSWER
Answered 2017-Nov-27 at 14:18Check line 4 of the dynamic target, as the error message states:
QUESTION
I have a tetrahedral mesh of a 3d region. The mesh is defined by two files with extensions .node and .ele which contain data related to nodes and elements (this is the format of output files from tetgen, the 3d Delaunay tetrahedralization program). The .node file contains in each line the node number and the x,y,z co-ordinates of that node. The .ele file contains the element number and node numbers corresponding to its four vertices. Now, given any point (x1,y1,z1), what is the easiest algorithm to decide which element this point belongs to?
...ANSWER
Answered 2017-Aug-02 at 21:24If you know the orientation of the faces of your tetrahedra, then you only need to compute the volume of tetrahedra formed by your point p=(x1,y1,z1) and each face of the tetrahedra. Point p is inside a tetrahedron if and only if it makes a positive volume with respect to each face.
Snippet from Computational Geometry in C.
QUESTION
I have a 3d mesh in .mesh format which can be read by medit visualization program. However I need to convert it into the .nodes, .ele and .face format that is the output format of tetgen (the 3d Delaunay tetrahedralization program) . What is the best way to do this conversion of formats? Is there a free program available to do this conversion?
...ANSWER
Answered 2017-Jul-31 at 19:03The MEDIT_TO_FEM program produces .node and .ele files from an medit .mesh file.
You might have to hack it to get triangles, though. It's simple: each (positively-oriented) tetrahedral element with vertices
v0 v1 v2 v3
has triangular faces
v0 v1 v2
v1 v3 v2
v2 v3 v0
v3 v1 v2
The orientation of the faces will of course depend on the orientation of the element, so your triangles might require a different ordering of their vertices.
QUESTION
Following example model shows a cylinder with some cell properties on the left . The „ModelFaceID“ is a property that defines the different faces of the model. The faces are highlighted in different colors in the 3D view (right):
On the spreadsheet, I can see that each cell has a specific „ModelFaceID“, which assigns the cell to one of the faces:
Now, I would like to change the „ModelFaceID“ in a new model that has only one face yet. I would like to select cells manually in the 3D View and change the „ModelFaceID“ respectively, so that I get different faces for the model. Unfortunately, I cannot change the property on the spreadsheet. Here, a picture with my new model. I selected the cells in the 3D view (left) and the spreadsheet (right):
How can I change the property? Can I achieve that in ParaView? Do you have any ideas which other tool I could use?
You can find the cylinder example here (cylinder.vtp): Cylinder Example
...ANSWER
Answered 2017-Jun-22 at 11:41In Paraview I would create a programmable filter and create a new Cell Data Array:
QUESTION
I am trying to compile dependencies of a C++ framework called FW4SPL
with cmake
in the terminal. By typing in the command make -j4
, it will automatically download, build and install each dependency.
But there is an error during the compilation.
...ANSWER
Answered 2017-Mar-14 at 06:55Open the CMakeLists.txt
file in the tetgen
folder which is inside the source folder.
Change the line above into the one below and save and close the file.
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