isoband | R package to generate contour lines | Computer Vision library
kandi X-RAY | isoband Summary
kandi X-RAY | isoband Summary
Generate contour lines (isolines) and contour polygons (isobands) from regularly spaced grids containing elevation data.
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QUESTION
I am using the R programming language. I am trying to install the following R library from github: https://rdrr.io/github/ModelOriented/treeshap/
As per the instructions from this website, I copy and pasted the following code to install this library (I could not find this library on CRAN):
...ANSWER
Answered 2021-Mar-28 at 02:47ERROR: compilation failed for package 'treeshap'
The problem is a compile error. Additionally, we see:
sh: c:/rtools40/mingw32/bin/g++: No such file or directory
The compilation is failing because g++
cannot be found. A good place to start would be to see if c:/rtools40
exists on your machine. If not, the Using Rtools40 on Windows article may help.
QUESTION
I have a large raster file (5GB) containing only 1's and NA's. I would like to convert this into a multipolygon of the areas with 1's, with adjacent cells dissolved into one polygon.
I have imported the file to R using
...ANSWER
Answered 2020-Oct-07 at 15:37What you are looking for is as.polygons()
from the terra
package, the raster
package's successor. terra
handles large data sets better than raster
does.
QUESTION
Upon opening a project on rstudio i have the following Warning:
...ANSWER
Answered 2020-Sep-15 at 22:47I think this is ultimately a small bug in renv
. Here's my guess at what's happening:
While this project has been initialized as an
renv
project, it does not have a lockfile for some reason. (Perhapsrenv::activate()
was called to initializerenv
without explicitly creating a lockfile?)The project has an
renv
autoloader; this is from a script atrenv/activate.R
. That script is configured to loadrenv 0.11.0
.When the project is loaded,
renv
finds thatrenv 0.12.0
is installed in the project library, not the expected version0.11.0
. This causes the warning to be emitted. (Perhapsrenv
was updated in that project previously?)
So, ultimately, the warning is misleading here -- the request for renv 0.11.0
comes directly from the autoloader, not from the lockfile (which does not exist). As for why the lockfile does not exist, I'm not sure -- but it most likely implies the project was initialized via renv::activate()
, and not by renv::init()
.
All that said -- you can safely re-generate the lockfile via renv::snapshot()
.
QUESTION
This is a direct follow up to How to interpret ggplot2::stat_density2d.
bins
has been re-added as an argument see this thread and the corresponding github issue, but it remains a mistery to me how to interpret those bins.
This answer (answer 1) suggests a way to calculate contour lines based on probabilities, and this answer argues that the current use of kde2d
in stat_density_2d would not mean that the bins can be interpreted as percentiles.
So the question.
When trying both approaches in order to get estimate quintile probabilities of the data, I get four lines as expected using the approach from answer 1, but only three lines with bins = 5
in stat_density_2d
. (which, as I believe, would give 4 bins!)
The fifth bin could be this tiny little dot in the centre which appears (maybe the centroid??)???
Is one of the ways utterly wrong? Or both? Or just two ways of estimating probabilities with their very own imprecision?
...ANSWER
Answered 2020-May-15 at 15:47I'm not sure this fully answers your question, but there has been a change in behaviour between ggplot v3.2.1 and v3.3.0 due to the way the contour bins are calculated. In the earlier version, the bins are calculated in StatContour$compute_group
, whereas in the later version, StatContour$compute_group
delegates this task to the unexported function contour_breaks
. In contour_breaks
, the bin widths are calculated by the density range divided by bins - 1
, whereas in the earlier version they are calculated by the range divided by bins
.
We can revert this behaviour by temporarily changing the contour_breaks
function:
Before
QUESTION
I have R
(version 3.6.3 (2020-02-29), Holding the Windsock
) installed on Ubuntu 18.04.4 LTS
. When I try to install ggplot2
from source, the installation of dependency package isoband
fails with testthat.h
not found. The full output:
ANSWER
Answered 2020-Apr-15 at 10:08Solved. The cause of the problem was that after a series of Ubuntu
and R
upgrades there were some outdated packages installed from source remained on my system.
First I opened up an R
console and looking for the paths for R
packages built with pre 3.6 version:
QUESTION
I am using hrbrthemes::theme_ipsum()
with most of my plots, but now I'm encountering odd behaviour while using ggupset
: An extra "at" above the x-axis label that I can neither find the origin of nor can get rid of.
If anyone could try to explain what's going on here (and how to get rid of it), that'd be great.
Note that I tried both the current CRAN and GitHub versions of hrbrthemes
.
Demonstration:
...ANSWER
Answered 2020-Mar-25 at 11:36The issue was caused by ggupset
, and has since been fixed.
If anyone else has encountered this, you can use the current development version: remotes::install_github("const-ae/ggupset")
, or wait for the CRAN release in the near future.
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