MrBayes | Bayesian inference and model choice | Machine Learning library

by NBISweden C Version: v3.2.7 License: GPL-3.0

X-Ray Key Features Code Snippets Community Discussions(2)Vulnerabilities Install Support

kandi X-RAY | MrBayes Summary

MrBayes is a C library typically used in Artificial Intelligence, Machine Learning applications. MrBayes has no bugs, it has no vulnerabilities, it has a Strong Copyleft License and it has low support. You can download it from GitHub.

This is the GitHub repository for MrBayes, a program used for Bayesian inference of phylogeny.

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Quality

Security

License

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Support

MrBayes has a low active ecosystem.

It has 180 star(s) with 74 fork(s). There are 52 watchers for this library.

It had no major release in the last 12 months.

There are 69 open issues and 134 have been closed. On average issues are closed in 325 days. There are no pull requests.

It has a neutral sentiment in the developer community.

The latest version of MrBayes is v3.2.7

Quality

MrBayes has no bugs reported.

Security

MrBayes has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

License

MrBayes is licensed under the GPL-3.0 License. This license is Strong Copyleft.

Strong Copyleft licenses enforce sharing, and you can use them when creating open source projects.

Reuse

MrBayes releases are available to install and integrate.

Installation instructions are not available. Examples and code snippets are available.

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MrBayes Key Features

No Key Features are available at this moment for MrBayes.

MrBayes Examples and Code Snippets

No Code Snippets are available at this moment for MrBayes.

Community Discussions

Trending Discussions on MrBayes

Is there a way to reorder tip labels of a phylo object so that they are consistent with another phylo object?

Rshiny app not displaying plot, just empty placeholder

QUESTION

Is there a way to reorder tip labels of a phylo object so that they are consistent with another phylo object?

Asked 2020-Aug-11 at 12:46

I have two trees that I am trying to compare. One from mrbayes, another from Paup.

When I use read.nexus, the resulting phylo objects have differently ordered tip labels, despite the fact that both files have the same nexus taxa block.

I've reproduced these trees below:

...

ANSWER

Answered 2020-Jul-07 at 15:03

The solution depends very much on what you want to do with the trees. Most phylogenetic comparative methods use identical names in trees and correctly assign them. A simple match for the two trees can be found as:

Source https://stackoverflow.com/questions/62756096

QUESTION

Rshiny app not displaying plot, just empty placeholder

Asked 2020-Apr-01 at 20:32

I'm trying to adapt one of the Rshiny app examples for my own use, (treesplit) but I'm struggling to incorporate my own data into the functions. I believe I have successfully incorporated my own data, but the plot itself isn't displaying. The webpage updates with the new space for the plot, but doesn't actually display it.

The functionality is as follows: Choosing yes will take you through the original app's pipeline. Choosing No will take you through my branch.

Choose "No", Then choose "Single", click on any row in the dataset, and click submit. The serverside has a hardcoded test dataset that will be used for the plot function.

I'm hoping someone can see whatever obvious thing I missed. (Pardon all of the libraries, they shouldn't be needed for the example I provided)

GLOBAL

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ANSWER

Answered 2020-Apr-01 at 20:32

Found it! I had missed one dependencey in this block of the server code:

Source https://stackoverflow.com/questions/60979102

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install MrBayes

You can download it from GitHub.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

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