logsumexp | Fast SSE logsumexp for python/numpy | Computer Vision library
kandi X-RAY | logsumexp Summary
kandi X-RAY | logsumexp Summary
Fast SSE logsumexp for python/numpy
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QUESTION
I am trying to train a BiLSTM-CRF on detecting new NER entities with Pytorch. To do so, I am using a snippet of code derivated from the Pytorch Advanced tutorial. This snippet implements batch training.
I followed the READ-ME in order to present data as required. Everything works great on CPU, but when I'm trying to get it to GPU, the following error occur :
...ANSWER
Answered 2021-Jun-22 at 15:58Within PadSequence
function (which acts as a collate_fn
which gathers samples and makes a batch from them) you are explicitly casting to cuda
device, namely:
QUESTION
I have a question, under a specific variable that for semplicitity we call a, I have the following arrays written in this way.
...ANSWER
Answered 2020-Sep-28 at 21:01Use the axis
parameter: logsumexp(a, axis=?)
, where ? Is 0 or 1
QUESTION
I have a line in some R code I am writing that is quite slow. It applies logSumExp across a 4 dimensional array using the apply command. I'm wondering are there ways to speed it up!
Reprex: (this might take 10seconds or more to run)
...ANSWER
Answered 2020-Jul-14 at 10:09rowSums
is a less general version of apply that is optimised for speed when adding up, so this can be used to speed up the calculation. Note the caveat in the helpfile ?rowSums
if it's important to maintain a difference in your calculations between NA
and NaN
.
QUESTION
Can someone help me with what will the below lines of Java do ? Or can you give an C# equivalent of the below lines of code
...ANSWER
Answered 2020-Jun-07 at 18:09Code using streams in Java usually translates well into LINQ in .NET.
map
or mapToXXX
works like Select
, reduce
is Aggregate
, but here Sum
is more convenient. IntStream.range
is Enumerable.Range
. Everything else should have a "obvious" equivalent.
QUESTION
Im trying to execute a Bayesian Neural Network that I found on the paper "Uncertainty on Deep Learning", Yarin Gal. I found this code on github:
...ANSWER
Answered 2020-Jun-04 at 23:09That syntax is correct vector = np.array([1, 2, 3])
. That is the way to define a vector in python's numpy.
A neural network can have any number o hidden (internal) layers. And each layer will have a certain number of neurons.
So in this code, a vector=np.array([100, 150, 100])
, means that the network should have 3 hidden layers (because the vector has 3 values), and the hidden layers should have, from input to output 100, 150, 100 neurons respectively.
QUESTION
As part of a statistical programming package, I need to add log-transformed values together with the LogSumExp Function. This is significantly less efficient than adding unlogged values together.
Furthermore, I need to add values together using the numpy.ufunc.reduecat functionality.
There are various options I've considered, with code below:
- (for comparison in non-log-space) use numpy.add.reduceat
- Numpy's ufunc for adding logged values together: np.logaddexp.reduceat
- Handwritten reduceat function with the following logsumexp functions:
- scipy's implemention of logsumexp
- logsumexp function in Python (with numba)
- Streaming logsumexp function in Python (with numba)
ANSWER
Answered 2020-Jan-22 at 18:42There is some room for improvement
But never expect logsumexp to be as fast as a standard summation, because exp
is quite a expensive operation.
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