datahub | centralized location for storing curated data

 by   cBioPortal HTML Version: v1.0.0 License: No License

kandi X-RAY | datahub Summary

kandi X-RAY | datahub Summary

datahub is a HTML library. datahub has no bugs and it has low support. However datahub has 1 vulnerabilities. You can download it from GitHub.

The datahub is a repository for store data only. It contains staging files which are pre-validated and can be loaded directly into the cBioPortal. Behind the scenes git-lfs is used to manage the large files.
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            kandi-support Support

              datahub has a low active ecosystem.
              It has 134 star(s) with 107 fork(s). There are 25 watchers for this library.
              OutlinedDot
              It had no major release in the last 12 months.
              There are 149 open issues and 540 have been closed. On average issues are closed in 120 days. There are 27 open pull requests and 0 closed requests.
              It has a neutral sentiment in the developer community.
              The latest version of datahub is v1.0.0

            kandi-Quality Quality

              datahub has no bugs reported.

            kandi-Security Security

              datahub has 1 vulnerability issues reported (1 critical, 0 high, 0 medium, 0 low).

            kandi-License License

              datahub does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

            kandi-Reuse Reuse

              datahub releases are available to install and integrate.
              Installation instructions, examples and code snippets are available.

            Top functions reviewed by kandi - BETA

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            Currently covering the most popular Java, JavaScript and Python libraries. See a Sample of datahub
            Get all kandi verified functions for this library.

            datahub Key Features

            No Key Features are available at this moment for datahub.

            datahub Examples and Code Snippets

            No Code Snippets are available at this moment for datahub.

            Community Discussions

            QUESTION

            How can I access the best neural network model identifed through RandomizedSearchCV
            Asked 2021-Jun-08 at 15:25

            I am looking to extract and use (within the same Jupyter notebook) the model identified as the best model from RandomizedSearchCV for future fitting and graphing. Specifically, I am looking to re-fit the Keras Neural Network identified as the best so that I can plot the loss and accuracy against the same or other dataset.

            If I run the following code, I get the output I expect - the best score and the paramaters used in obtaining that score.

            ...

            ANSWER

            Answered 2021-Jun-07 at 21:35

            grid_result.best_estimator_ contains the refit estimator (since you've left the default value for the refit parameter), which is a fitted clone of your clf. That happens to be a pipeline object (with two steps) in your case; if you want to access the keras model, you can access it as though a dictionary:

            grid_result.best_estimator_['model'] will be a fitted KerasClassifier object. And those have the model attribute which contains the native keras object:

            grid_result.best_estimator_['model'].model

            Source https://stackoverflow.com/questions/67890007

            QUESTION

            SignalR dotnet 3.1 webapi hosted on IIS 8 (WebSocket enabled) works few minutes only
            Asked 2021-May-29 at 03:55

            I am hosting a dotnet 3.1 WebApi with SignalR on IIS 8 with WebSocket Protocol enabled on the server. The hosted API application works just fine for the first few minutes but stops working after a while and doesn't respond to any requests.

            Client-end is in Angular 11, which works as it should be. but when this happens, the client-side takes a long time to finish the API request.

            And have to restart the application then again it works for few minutes.

            IIS log shows this error

            System.InvalidOperationException: The 'InvokeCoreAsync' method cannot be called if the connection is not active

            Searched for this error but nothing is working till now.

            Controller Constructure ...

            ANSWER

            Answered 2021-May-29 at 03:55

            Thanks, @lex-li for mentioning the issue with the controller instance. So now the Hub is instantiated with IHubContext and that apparently solved the issue here.

            Source https://stackoverflow.com/questions/67702124

            QUESTION

            Kerberros GSSAPI doesn't work within kafkacat alpine container
            Asked 2021-May-13 at 11:50

            Previously I've reported it into kafkacat tracker but the issue has been closed as related to cyrus-sasl/krb5.

            ...

            ANSWER

            Answered 2021-May-13 at 11:50

            Very strange issue, and honestly I can't say why, but adding into krb5.conf:

            Source https://stackoverflow.com/questions/67509575

            QUESTION

            Pandas-Python how to extract data from a column
            Asked 2021-Apr-28 at 09:18

            Panda receive data from a url and make a data table, how do I extract a specific column from this dataframe into a list. Specifically, here is my code to allow panda to retrieve the information from the url

            ...

            ANSWER

            Answered 2021-Apr-28 at 01:29

            This should work for your use case:

            Source https://stackoverflow.com/questions/67292564

            QUESTION

            Geojson not displayed on the map
            Asked 2021-Apr-20 at 11:10

            I would like to create a covid map which uses geojson to download countries from "countries.json" unfortunately the countries do not show on the map

            1. Here is the link to my work effects: https://neqts.github.io/map/
            2. And here is the link to the source code:https://github.com/neqts/map/tree/master
            3. It should looks like this : https://datahub.io/core/geo-countries

            Help...

            ...

            ANSWER

            Answered 2021-Apr-20 at 10:48

            You are almost there. Just import the countries json, delete local countries variable and pass countries as prop to your CovidMap component

            Source https://stackoverflow.com/questions/67176778

            QUESTION

            OData unbound function with a string parameter does not seem to work - OData DotNetCore
            Asked 2021-Apr-15 at 14:33

            I have been looking into OData for .NETCORE for the first time but can't seem to achieve something quite simple.

            I have created an unbound function which returns a string and accepts a string parameter, I have read multiple docs and copied exactly what they did there (except, I replaced the int parameter for a string).

            So I ended up with the following setup (I am using .NET 5 / API):

            ...

            ANSWER

            Answered 2021-Apr-15 at 14:33

            String parameters have to be provided in single quotes:

            localhost/api/GetClients(UserId='abc')

            Source https://stackoverflow.com/questions/67109916

            QUESTION

            Loop results from python into django
            Asked 2021-Apr-14 at 17:30

            I have a simple application that queries a remote URL for a city code.

            views.py

            ...

            ANSWER

            Answered 2021-Apr-14 at 17:30

            QUESTION

            Is it possible to make a doubly-inherited custom task in Gradle?
            Asked 2021-Mar-30 at 11:55

            I'm working on a Gradle (Groovy, not Kotlin) library using a bunch of external libraries, and we have a case where we want to implement double-inheritance in our code off of a custom Task provided by an external library. (For reference, that library is specifically the MarkLogic DataHub, and we're extending RunFlowTask, but I've generalized a bit for this example. There are a few restrictions that introduces, but I'm fairly certain all of them can be worked around.)

            What I want is the following:

            ClassA.gradle

            ...

            ANSWER

            Answered 2021-Mar-30 at 11:55

            Answer was on the second attempt. In build.gradle, it needed to be:

            Source https://stackoverflow.com/questions/66643687

            QUESTION

            how to set first value of array as default in cascading dropdown in react hooks
            Asked 2021-Mar-30 at 10:00

            I am using material UI to list dropdown value I have a hub,Country and account dropdown fields i want to set the first value of the array object to select initial value selected.

            data file:

            ...

            ANSWER

            Answered 2021-Mar-30 at 08:51

            Try using defaultValue instead of value in tag.

            Source https://stackoverflow.com/questions/66867540

            QUESTION

            Marklogic Data hub: Triples are not generated in the Mapping output file
            Asked 2021-Mar-30 at 01:32

            I am using the latest versions of Marklogic datahub and MarkLogic Server.

            • Data Hub 5.4.1 QuickStart
            • MarkLogic Server Version 10.0-6.2

            In MarkLogic Datahub, I have created a flow for a data source.

            Here the data source is reading data from csv files.

            I have created an entity and I am able to do the Ingestion and Mapping.

            After executing the Ingestion and Mapping steps, I have observed that the triples do not get generated in the mapping output file.

            Am I missing some steps here which is required for the data hub to generate the triples in the Mapping output file?

            I kindly request you to help me in this regard.

            Thank You.

            ...

            ANSWER

            Answered 2021-Mar-30 at 01:32

            A standard data hub mapping flow never fills in the triples section of the envelope.

            By default, neither does a custom mapping step, unless you explicitly put some triples in there.

            However, if you have defined an entity and mapped to it, then the data hub will insert triples into the triple index under the covers.

            You can verify this on your database by going into query console, selecting the Final database, and running the following SparQL query:

            Source https://stackoverflow.com/questions/66850360

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install datahub

            You can download it from GitHub.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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          • HTTPS

            https://github.com/cBioPortal/datahub.git

          • CLI

            gh repo clone cBioPortal/datahub

          • sshUrl

            git@github.com:cBioPortal/datahub.git

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