RxNorm | Full stack application to search medications using RxNorm
kandi X-RAY | RxNorm Summary
kandi X-RAY | RxNorm Summary
RxNorm is a full stack web application built using Ruby on Rails, PostgreSQL, React, and Redux. It enables users to find all generic and branded drugs that contain the same active ingredients as a reference drug. A capability like this could, for example, help clinicians provide guidance to patients with price or coverage concerns about the reference drug, or to help work around out-of-stock situations at the local pharmacy.
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QUESTION
Is there a mapping of FHIR systems to OMOP vocabularies?
The FHIR messages I’m working with are using things like this:
SNOMED http://snomed.info/sct
RxNorm http://www.nlm.nih.gov/research/umls/rxnorm
…and OMOP uses things like this:
So, I need something that will tell me when I see “http://snomed.info/sct” in my FHIR message I should be looking for the OMOP vocabulary with the vocabulary_id of “SNOMED”
...ANSWER
Answered 2022-Feb-01 at 12:07There's a set of candidate mappings here: https://docs.google.com/spreadsheets/d/1ykzbW-RMRJV4doIpZANibu45WveLFoFA/edit?usp=sharing&ouid=111904620053364392286&rtpof=true&sd=true
Note that these are just candidates that I made up. They're not approved by either the FHIR or OMOP communities. There's a joint working party between HL7 and OHDSI working through those proposed mappings checking them and filling in the blanks.
QUESTION
I have a script that loads information about medications, like you would find in RxNorm, into a Solr core. There's a relatively constant schema for all of the documents. See below.
I would also like to add a document to the core with two properties:
- the date on which the core was populated
- the version of the software that did the population
Are there established ways to do that? I'm using R's solrium
package.
Could this be considered a bad idea? Is there some way to lock the core so changes can't be made after the version document is added? I do have a customized schema.xml
, but otherwise this is a pretty vanilla Solr setup.
select?q=medlabel%3Aacetaminophen
gets
...ANSWER
Answered 2020-Oct-02 at 22:12You can set a collection in read only mode after indexing your content into it using MODIFYCOLLECTION
. That will effectively give you a read-only collection which does not allow any updates.
My recommendation for your other case would be to have that field present on each document instead of as a separate document (which sure, that'd work as well). But if your number of documents is very large, add a separate document with the metadata you need.
However, you can also use MODIFYCOLLECTION
for this to attach properties to the collection itself:
The attributes that can be modified are:
- other custom properties that use a property. prefix
So you can add property.client_version
and property.populated_datetime
properties to the collection itself, which would then be replicated properly across your cluster if needed. The collection also have a last index update time available, but this might be node specific (since the commits can happen in different timeframes on each node). It won't let you attach the client version anyhow.
QUESTION
I'm fairly new to JSONPath so this could be my fault but when I try this expression in an online evaluator (https://jsonpath.com/) it works but does not in Karate.
...ANSWER
Answered 2020-Jul-14 at 14:10The JsonPath engine is known to have issues with such complex expressions. Please use karate.filter()
instead which I am sure you will agree is much more readable: https://github.com/intuit/karate#json-transforms
QUESTION
I have a DataFrame with following content:-
...ANSWER
Answered 2020-May-27 at 08:03Would this be something you were looking for?
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