FALCON | experimental PacBio diploid assembler Out-of-date

by PacificBiosciences Python Version: Current License: Non-SPDX

X-Ray Key Features Code Snippets Community Discussions(10)Vulnerabilities Install Support

kandi X-RAY | FALCON Summary

FALCON is a Python library. FALCON has no bugs, it has no vulnerabilities, it has build file available and it has low support. However FALCON has a Non-SPDX License. You can download it from GitHub.

FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries

Support

Quality

Security

License

Reuse

Support

FALCON has a low active ecosystem.

It has 194 star(s) with 99 fork(s). There are 57 watchers for this library.

It had no major release in the last 6 months.

There are 130 open issues and 451 have been closed. On average issues are closed in 130 days. There are 4 open pull requests and 0 closed requests.

It has a neutral sentiment in the developer community.

The latest version of FALCON is current.

Quality

FALCON has 0 bugs and 0 code smells.

Security

FALCON has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

FALCON code analysis shows 0 unresolved vulnerabilities.

There are 0 security hotspots that need review.

License

FALCON has a Non-SPDX License.

Non-SPDX licenses can be open source with a non SPDX compliant license, or non open source licenses, and you need to review them closely before use.

Reuse

FALCON releases are not available. You will need to build from source code and install.

Build file is available. You can build the component from source.

Installation instructions are not available. Examples and code snippets are available.

FALCON saves you 5668 person hours of effort in developing the same functionality from scratch.

It has 11858 lines of code, 707 functions and 106 files.

It has high code complexity. Code complexity directly impacts maintainability of the code.

Top functions reviewed by kandi - BETA

kandi has reviewed FALCON and discovered the below as its top functions. This is intended to give you an instant insight into FALCON implemented functionality, and help decide if they suit your requirements.

Generate a networkx graph .
Convert ovlp output to a networkx graph .
Find the bundle of a given start node
Construct a list of compound paths .
Generate parallel tasks .
Fetch ref and read ids from a FASTA file .
Identify all simple paths in a graph .
Construct the C path from the UG .
Write dynamic rules .
Resolve duplicate edges .

Get all kandi verified functions for this library.

FALCON Key Features

No Key Features are available at this moment for FALCON.

FALCON Examples and Code Snippets

No Code Snippets are available at this moment for FALCON.

Community Discussions

Trending Discussions on FALCON

Is there a way to show only the top 2/nth of a query after "group by" country? - bigquery SQL

Store values in multidimensional array from BufferedReader

C++ error: expected class member or base class name ...int e, int f, string pa, string direct, string distrib) : public Video

How can I find the smallest difference between values within a group

"If-element" does not react when calling included template

Working through duplicates along rows in DataFrame and deleting all except the last one in Python Pandas

Cannot interpret 'CategoricalDtype'

To send mail Embedded with image in Lambda function using nodeJS

create new column that telling the values why they are not selected on pandas?

For loops output all the same value

QUESTION

Is there a way to show only the top 2/nth of a query after "group by" country? - bigquery SQL

Asked 2021-Jun-10 at 03:57

I am doing a query on Google Big query, I have joined the 2 tables and created a new column "total gmv" using "SUM" to represent the total revenue, now I wanted to show only the top 2 vendors , GROUP BY country in my query.

I manage to show total_gmv group by COUNTRY and vendor_name, but I would like to filter to show top 2 vendors for each country only.

Code I used

...

ANSWER

Answered 2021-Jun-10 at 02:56

Use ROW_NUMBER:

Source https://stackoverflow.com/questions/67913960

QUESTION

Store values in multidimensional array from BufferedReader

Asked 2021-Jun-08 at 17:05

I have an assignment for a car rental system which requires the program to read the from a CSV file, which contains each car and its specifications.

I will need to store the values into an array, as I will need to count how many cars are left after one is hired, as well as calculate the cost which is listed for each car.

...

ANSWER

Answered 2021-Jun-06 at 06:01

Splitting by comma, is the right way, you just need to store the the array returned from the split function into an ArrayList or an array of Strings array, like this:

Source https://stackoverflow.com/questions/67856062

QUESTION

C++ error: expected class member or base class name ...int e, int f, string pa, string direct, string distrib) : public Video

Asked 2021-May-30 at 17:11

We think we have an issue with our inheritance, but we don't know how to solve it. (We have Class OOP)

Console prints...

...

ANSWER

Answered 2021-May-30 at 15:43

You declare inheritance as public. You do not declare constructors the same way.

In other words:

Source https://stackoverflow.com/questions/67762923

QUESTION

How can I find the smallest difference between values within a group

Asked 2021-May-26 at 14:19

EXAMPLE DF

...

ANSWER

Answered 2021-May-26 at 14:06

We can check groupby with diff

Source https://stackoverflow.com/questions/67706413

QUESTION

"If-element" does not react when calling included template

Asked 2021-May-21 at 07:21

I am looking to build a simple logic to let user define which templates that should be called upon. The code illustrates a minimized example. The setup is very useful when having many templates, e.g. the output I am building is about 2.600 lines of XHTML code. Then it is very good being able to exclude several templates to focus on only some of the templates.

I have created above setup (previously) successfully having XML as source file and modularized code. I suspect it is my setup with having JSON as source file and the adaption of code that causes the problem.

Below code should allow the user to switch variable "build-with-books" from 0 to 1, and if set to 1, the "if" element should call the included template.

I am sure that there are many "smarter" way of solving my needs. Currently I am just looking to understand why my code does not follow the wanted logics of switching on/off the build of elements.

XSLT fiddle is down so I just paste my code below:

data:

...

ANSWER

Answered 2021-May-21 at 07:21

Start

Delete this part from principal.xsl: (call-template uses the current context and that is still your match on data)

Source https://stackoverflow.com/questions/67627872

QUESTION

Working through duplicates along rows in DataFrame and deleting all except the last one in Python Pandas

Asked 2021-May-18 at 04:44

I am miserably stuck at Pandas Data Cleaning. I have made a very simple example to demonstrate my problem. For each row, I want to delete/alter the duplicate and keep the last one. Currently, my DataFrame is 'animals'. And I want it to be the DataFrame 'animals_clean'

Imagine this DataFrame. You can see duplicates along axis=0, e.g. 'cat' is repeated in row 0

...

ANSWER

Answered 2021-May-17 at 23:52

Try apply + mask + duplicated with keep='last':

Source https://stackoverflow.com/questions/67578244

QUESTION

Cannot interpret 'CategoricalDtype'

Asked 2021-May-14 at 02:12

I would like to split variables into the different types. For example:

...

ANSWER

Answered 2021-May-14 at 02:12

Update:

That was surprisingly more complicated that I thought it would be, but here is a work around using list comprehension:

Source https://stackoverflow.com/questions/67525063

QUESTION

To send mail Embedded with image in Lambda function using nodeJS

Asked 2021-May-13 at 04:06

I have created lambda function in AWS which send mail to various recipients. I need to add company logo/banner at bottom of the mail. Below is the code

...

ANSWER

Answered 2021-May-13 at 04:06

Here are some of the options:

If you can use CloudFront in-front of S3 and use the CloudFront URL for the static content, do so. Here is more information.
You can also host the static content on any publicly accessible website e.g. on Github pages which is also a CDN for free.
You can use Data URLs in place of the images. You must convert the images to the Base64 encoded version and use them directly in the HTML.
You can use SVG as an image. You must convert your existing images to SVG and directly embed the contents in the HTML.

Source https://stackoverflow.com/questions/67193261

QUESTION

create new column that telling the values why they are not selected on pandas?

Asked 2021-May-03 at 00:45

Input

...

ANSWER

Answered 2021-May-03 at 00:43

If you put the conditions into a dictionary, you can automatically assign() an arbitrary number of conditions as columns:

Source https://stackoverflow.com/questions/67362002

QUESTION

For loops output all the same value

Asked 2021-Apr-26 at 03:12

So I have a json list and use two input request.args.get('sport') and request.args.get('team') to find those values in my list. If the value is found I want to output more info on the team and sport.

This is what I tried to do:

...

ANSWER

Answered 2021-Apr-25 at 17:58

        for team in scores_list['scores']:
            teams_list.append("{} ({}) ({}) {} ({}) - ({}) {}".format(team['full_name'], team['date'],
                                                                      team['sport'], team['home_name'],
                                                                      team['home_score'], team['away_score'],
                                                                      team['away_name']))

Source https://stackoverflow.com/questions/67256025

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install FALCON

You can download it from GitHub.
You can use FALCON like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .

Find more information at: