dredge | A Python package for assisting with data mining work

 by   amechtley Python Version: Current License: No License

kandi X-RAY | dredge Summary

kandi X-RAY | dredge Summary

dredge is a Python library. dredge has no bugs, it has no vulnerabilities and it has low support. However dredge build file is not available. You can download it from GitHub.

The MIT License (MIT). Copyright (c) 2013 Adam Mechtley.
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            kandi-support Support

              dredge has a low active ecosystem.
              It has 1 star(s) with 0 fork(s). There are no watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              dredge has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of dredge is current.

            kandi-Quality Quality

              dredge has 0 bugs and 0 code smells.

            kandi-Security Security

              dredge has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
              dredge code analysis shows 0 unresolved vulnerabilities.
              There are 0 security hotspots that need review.

            kandi-License License

              dredge does not have a standard license declared.
              Check the repository for any license declaration and review the terms closely.
              OutlinedDot
              Without a license, all rights are reserved, and you cannot use the library in your applications.

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              dredge releases are not available. You will need to build from source code and install.
              dredge has no build file. You will be need to create the build yourself to build the component from source.
              It has 723 lines of code, 38 functions and 14 files.
              It has medium code complexity. Code complexity directly impacts maintainability of the code.

            Top functions reviewed by kandi - BETA

            kandi has reviewed dredge and discovered the below as its top functions. This is intended to give you an instant insight into dredge implemented functionality, and help decide if they suit your requirements.
            • Batch download .
            • do multi - parse_to_csv
            • Dumps data into csv
            • Merges csv files into a single file .
            • Perform a multi - process .
            • Sort a list of file paths to load .
            • Return a urllib2 opener .
            • Returns a tuple of slices for multiprocessing .
            • Return the number of cores to use .
            Get all kandi verified functions for this library.

            dredge Key Features

            No Key Features are available at this moment for dredge.

            dredge Examples and Code Snippets

            No Code Snippets are available at this moment for dredge.

            Community Discussions

            QUESTION

            Clustering in R using K-mean
            Asked 2021-Dec-17 at 17:31

            I tried to cluster my dataset using K-mean, but there is a categorical data in column 9; so when I ran k-mean it had an error like this:

            ...

            ANSWER

            Answered 2021-Dec-17 at 17:31

            To solve your specific issue, you can generate dummy variables to run your desired clustering.

            One way to do it is using the dummy_columns() function from the fastDummies package.

            Source https://stackoverflow.com/questions/70364971

            QUESTION

            How to join to column after imputation
            Asked 2021-Dec-14 at 22:53

            I ran multiple imputation to impute missing data for 2 variables of a data frame, then I got a new data frame (with 2 columns for 2 imputed variables).

            Now, I want to replace the 2 columns in the original data frame with the two newly imputed columns from my new dataframe. What should I do?

            Original data frame new data frame for imputed variables

            This is the code I used. Only 2 columns in this data frame are missing data, so I only imputed those two. Is that ok? Can you please suggest me a better way?

            ...

            ANSWER

            Answered 2021-Dec-14 at 22:53

            Updated

            As @dcarlson recommended, you can run mice on the entire dataframe, then you can use complete to get the whole output dataframe. Then, you can join the new data with your original dataframe.

            Source https://stackoverflow.com/questions/70355091

            QUESTION

            Dredge on GAM returns NA results for logLik, AICc, delta and weight
            Asked 2021-Jul-26 at 10:48

            I have a global moel with two smoothed terms and two random effects.

            ...

            ANSWER

            Answered 2021-Jul-26 at 10:48

            This is because you have used quasibinomial family, which does not give a log-likelihood, and so no AIC can be calculated. You might try bam rather than gam, since this is such a large dataset.

            Source https://stackoverflow.com/questions/68497297

            QUESTION

            Add Row after specified
            Asked 2020-Dec-09 at 13:38

            Basically I have a table and a user can add rows. Depending on row type, they are added a little differently. A standard row is always added by .append(), but an "instruction" row should always be added after the last row that was created or modified.

            ...

            ANSWER

            Answered 2020-Dec-09 at 13:16

            As your varialble newRow is a string, when you do:

            Source https://stackoverflow.com/questions/65217290

            QUESTION

            Returning keys in a dictionary for every value in a list in Python
            Asked 2020-Nov-03 at 07:26

            So I have a JSON file which I have loaded into a dictionary. It has 8 different keys that it is storing information for. I am trying to create a search engine that returns the recipe that contains all the words in the search string and returns them. I change the string into a list of "tokens" that I will be used for searching.

            Here is an example of some of the information stored in the dictionary. A recipe should be returned as long as the tokens are located in either the title, categories, ingredients or directions.

            ...

            ANSWER

            Answered 2020-Nov-03 at 07:26

            I think what you want is the following:

            Source https://stackoverflow.com/questions/64624546

            QUESTION

            Plotting prediction from averaged GLM model: Error in eval(predvars, data, env) : object 'x3' not found
            Asked 2020-Sep-10 at 17:51

            I have produced an averaged GLM model (to find the habitat preference of a species), and I want to graph the shape of the relationship for each of the most important variables, “x1” and “x3” (understorey cover and canopy cover), against my response variable, “species” (species presence). I have been using the “predict”(predict.averaging) function, but I keep running into the same error:

            Error in eval(predvars, data, env) : object 'x3' not found

            More details and code:

            My dataset, “data.csv”, is a table with 13 rows. The first 12 rows are scaled habitat variables (10 continuous, 2 categorical), named x1-x12. Row 13 is the response variable – species presence/absence (1 or 0). Here is my code:

            library(MuMIn)

            dataset <- read.csv(file = 'data.csv', stringsAsFactors = FALSE)

            options(na.action = "na.fail")

            m1 <- glm(species ~ x1 + x2 + x3 + x4 + x5 + x6 + x7 + x8 + x9 + x10 + x11 + x12, data=Dataset, family=binomial())

            ms1 <- dredge(m1) #Running different model combinations

            d2subset <- get.models(ms1, subset = delta < 2) #Models with delta AIC <2 are selected.

            avgm <- model.avg(d2subset) #DeltaAIC<2 models are averaged.

            summary(avgm) #Shows 'x1' to be the most significant variable.

            The following code, attempting to predict from the averaged model, causes an error:

            predict(avgm, data.frame(dataset$x1), se.fit = TRUE, type = "link", backtransform = TRUE, full = TRUE)

            Errors produced:

            Error in predict.averaging(avgm, dataset$x1), se.fit = TRUE, :

            'predict' for models '2211', '163', '147', '179', '2227', '183', '131', '2195', '167', '2275', '227', '243', '211', '148', '1171', '435', '151', '3235', '247', '2215', '155', '2231', '659', '2291', '2219' and '171' caused errors.

            In addition: There were 26 warnings (use warnings() to see them)

            Warning messages: 1: In eval(predvars, data, env) : object 'x3' not found

            2-13: In eval(predvars, data, env) : object 'x3' not found

            14: In eval(predvars, data, env) : object 'x5' not found

            15-26: In eval(predvars, data, env) : object 'x3' not found

            I have looked into this a lot, but I still don't understand where the error comes from or how to work around it. I would be very grateful for any suggestions. Thank you!

            ...

            ANSWER

            Answered 2020-Sep-10 at 14:53

            Since the model includes covariates x1-x12 you need to include all variables for predict, not just x1.

            Source https://stackoverflow.com/questions/63831984

            QUESTION

            extract exponential coefficients from models MuMIn::dredge
            Asked 2020-Jul-29 at 13:57

            I'm trying to exponentiate coefficients and standard errors from multiple Poisson models from a MuMIn::dredge object to use with texreg::screenreg. In the case of one model we can do this:

            ...

            ANSWER

            Answered 2020-Jul-29 at 13:57

            texreg's extract method for the "averaging" object returns a list of texreg objects, with one element for each model. You need to apply @coef and @se to each element. For example:

            Source https://stackoverflow.com/questions/63135735

            QUESTION

            How to use R to convert a list of names into an equation for Dredge
            Asked 2020-Apr-03 at 19:21

            I want to automate turning lists of names into regression equations for use in the Dredge command from the MuMIn package.

            Making this:

            ...

            ANSWER

            Answered 2020-Apr-03 at 04:24

            You could use reformulate to construct the formula

            Source https://stackoverflow.com/questions/61005029

            QUESTION

            Dredge MuMIn: when using a dredge on a GLMM, does the null model include random effects?
            Asked 2020-Feb-24 at 16:58

            I have a global model using a GLMM with 5 fixed effects with interactions, as well as two random effects.

            ...

            ANSWER

            Answered 2020-Feb-24 at 16:58

            Yes.

            Here's an experimental illustration that dredge() drops only fixed effects, leaving the null model as (intercept + all random effects)

            Source https://stackoverflow.com/questions/60377979

            QUESTION

            React JS: How do I create a downloadable link with PDF documents to download?
            Asked 2020-Feb-04 at 15:34

            I am building a small website example project using HTML, CSS and JS. I have a button that after click should download PDF example data (for now it is not necessary where to save the documents).

            The problem: How to I download PDF documents using an HTML button?

            I am using reactstrap Card for each component I would like to download the data. This is an example only, and the real website will contain for each card a button with specific downloadable information.

            Below SideBar.js:

            ...

            ANSWER

            Answered 2020-Feb-04 at 15:34

            This isn't a react specific issue. But if you want to make it more React-like, you could do:

            Source https://stackoverflow.com/questions/60059997

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install dredge

            You can download it from GitHub.
            You can use dredge like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            https://github.com/amechtley/dredge.git

          • CLI

            gh repo clone amechtley/dredge

          • sshUrl

            git@github.com:amechtley/dredge.git

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