auto-sklearn | Automated Machine | Machine Learning library

by automl Python Version: v0.14.6 License: BSD-3-Clause

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kandi X-RAY | auto-sklearn Summary

auto-sklearn is a Python library typically used in Institutions, Learning, Education, Artificial Intelligence, Machine Learning applications. auto-sklearn has no bugs, it has no vulnerabilities, it has build file available, it has a Permissive License and it has medium support. You can download it from GitHub, GitLab.

Automated Machine Learning with scikit-learn

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auto-sklearn has a medium active ecosystem.
It has 6205 star(s) with 1145 fork(s). There are 213 watchers for this library.
There were 4 major release(s) in the last 12 months.
There are 108 open issues and 752 have been closed. On average issues are closed in 127 days. There are 9 open pull requests and 0 closed requests.
It has a neutral sentiment in the developer community.
The latest version of auto-sklearn is v0.14.6

auto-sklearn Support

Best in #Machine Learning

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auto-sklearn Support

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Average in #Machine Learning

quality kandi Quality

auto-sklearn has 0 bugs and 0 code smells.

auto-sklearn Quality

Best in #Machine Learning

Average in #Machine Learning

auto-sklearn Quality

Best in #Machine Learning

Average in #Machine Learning

security Security

auto-sklearn has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.
auto-sklearn code analysis shows 0 unresolved vulnerabilities.
There are 0 security hotspots that need review.

auto-sklearn Security

Best in #Machine Learning

Average in #Machine Learning

auto-sklearn Security

Best in #Machine Learning

Average in #Machine Learning

license License

auto-sklearn is licensed under the BSD-3-Clause License. This license is Permissive.
Permissive licenses have the least restrictions, and you can use them in most projects.

auto-sklearn License

Best in #Machine Learning

Average in #Machine Learning

auto-sklearn License

Best in #Machine Learning

Average in #Machine Learning

build Reuse

auto-sklearn releases are available to install and integrate.
Build file is available. You can build the component from source.
Installation instructions are not available. Examples and code snippets are available.
It has 34349 lines of code, 1704 functions and 322 files.
It has medium code complexity. Code complexity directly impacts maintainability of the code.

auto-sklearn Reuse

Best in #Machine Learning

Average in #Machine Learning

auto-sklearn Reuse

Best in #Machine Learning

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Top functions reviewed by kandi - BETA

kandi has reviewed auto-sklearn and discovered the below as its top functions. This is intended to give you an instant insight into auto-sklearn implemented functionality, and help decide if they suit your requirements.

Run the ensemble builder

Sanitize an array
Calculate scores for a given solution
Compute a single score

Load the prediction files

Retrieve a dictionary of configuration matrices
Return a dict of hyperparameters

Returns a pandas DataFrame of the leaderboard

Return the leaderboard columns

Create a markdown summary for comparisons

Return the intersection of two items

Get hyperparameter search space

Get base search space

Fit the model

Lists the models in the ensemble

Iterate through the indices of the classes

Get a hyperparameter search space

Return the cv results as a dictionary

Run the builder

Fit the neural network

Returns a dictionary of hyperparameters

Retrieve the configuration matrices

Predict for each strategy

Fit an MLPClassifier

Fit the optimizer

Returns a hyperparameter search space

Return list of models

Fit a pipeline

Get all kandi verified functions for this library.

auto-sklearn Key Features

Automated Machine Learning with scikit-learn

auto-sklearn Examples and Code Snippets

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auto-sklearn in four lines of code

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import autosklearn.classification
cls = autosklearn.classification.AutoSklearnClassifier()
cls.fit(X_train, y_train)
predictions = cls.predict(X_test)

Relevant publications

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@inproceedings{feurer-neurips15a,
    title     = {Efficient and Robust Automated Machine Learning},
    author    = {Feurer, Matthias and Klein, Aaron and Eggensperger, Katharina  Springenberg, Jost and Blum, Manuel and Hutter, Frank},
    booktitle = {Advances in Neural Information Processing Systems 28 (2015)},
    pages     = {2962--2970},
    year      = {2015}
}

How can update trained IsolationForest model with new datasets/datafarmes in python?

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# Model
from sklearn.ensemble import IsolationForest

# Saving file
import joblib

# Data
import numpy as np

# Create a new model
model = IsolationForest()

# Generate some old data
df1 = np.random.randint(1,100,(100,10))
# Train the model
model.fit(df1)

# Save it off
joblib.dump(model, 'isf_model.joblib')

# Load the model
model = joblib.load('isf_model.joblib')

# Generate new data
df2 = np.random.randint(1,500,(1000,10))

# If the original data is now not important, I can just call .fit() again.
# If you are using time-series based data, this is preferred, as older data may not be representative of the current state
model.fit(df2)

# If the original data is important, I can simply join the old data to new data. There are multiple options for this:
# Pandas: https://pandas.pydata.org/pandas-docs/stable/user_guide/merging.html
# Numpy: https://numpy.org/doc/stable/reference/generated/numpy.concatenate.html

combined_data = np.concatenate((df1, df2))
model.fit(combined_data)

How to specify Search Space in Auto-Sklearn

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cs = mdl.get_configuration_space(X, y)
config = cs.sample_configuration()
config._values['classifier:random_forest:n_estimators'] = 1000
pipeline, run_info, run_value = mdl.fit_pipeline(X=X_train, y=y_train,
                                                 config=config,
                                                 X_test=X_test, y_test=y_test)

See all related Code Snippets

Community Discussions

Trending Discussions on auto-sklearn

How can update trained IsolationForest model with new datasets/datafarmes in python?
How to specify Search Space in Auto-Sklearn
Python creates Folder inside docker image but remove when processing completes
Is it possible to use azureml without any login things?

Trending Discussions on auto-sklearn

QUESTION

How can update trained IsolationForest model with new datasets/datafarmes in python?

Asked 2022-Mar-02 at 20:42

Let's say I fit IsolationForest() algorithm from scikit-learn on time-series based Dataset1 or dataframe1 df1 and save the model using the methods mentioned here & here. Now I want to update my model for new dataset2 or df2.

My findings:

this workaround about Incremental learning from sklearn:

...learn incrementally from a mini-batch of instances (sometimes called “online learning”) is key to out-of-core learning as it guarantees that at any given time, there will be only a small amount of instances in the main memory. Choosing a good size for the mini-batch that balances relevancy and memory footprint could involve tuning.

but Sadly IF algorithm doesn't support estimator.partial_fit(newdf)

auto-sklearn offers refit() is also not suitable for my case based on this post.

How I can update the trained on Dataset1 and saved IF model with a new Dataset2?

ANSWER

Answered 2022-Mar-02 at 17:41

You can simply reuse the .fit() call available to the estimator on the new data.

This would be preferred, especially in a time series, as the signal changes and you do not want older, non-representative data to be understood as potentially normal (or anomalous).

If old data is important, you can simply join the older training data and newer input signal data together, and then call .fit() again.

Also sidenote, according to sklearn documentation, it is better to use joblib than pickle

An MRE with resources below:

# Model
from sklearn.ensemble import IsolationForest

# Saving file
import joblib

# Data
import numpy as np

# Create a new model
model = IsolationForest()

# Generate some old data
df1 = np.random.randint(1,100,(100,10))
# Train the model
model.fit(df1)

# Save it off
joblib.dump(model, 'isf_model.joblib')

# Load the model
model = joblib.load('isf_model.joblib')

# Generate new data
df2 = np.random.randint(1,500,(1000,10))

# If the original data is now not important, I can just call .fit() again.
# If you are using time-series based data, this is preferred, as older data may not be representative of the current state
model.fit(df2)

# If the original data is important, I can simply join the old data to new data. There are multiple options for this:
# Pandas: https://pandas.pydata.org/pandas-docs/stable/user_guide/merging.html
# Numpy: https://numpy.org/doc/stable/reference/generated/numpy.concatenate.html

combined_data = np.concatenate((df1, df2))
model.fit(combined_data)

Source https://stackoverflow.com/questions/71326545

QUESTION

Python creates Folder inside docker image but remove when processing completes

Asked 2021-Feb-18 at 12:27

Python Program does create folder and put some files over there. But when i try to run the program inside docker via CMD It creates the folder and put files over there and upon completion, the folder somehow gets removed or doesnt show inside the docker image.

I have tried the following things:

Check Folder Exist after creating - It shows folder created over there.
Check inside the docker image using bash - It doesnt show the folder and contents.

The dockerfile is

FROM ubuntu:18.04

# Upgrade installed packages

RUN apt update
RUN apt upgrade -y
ENV TZ=Europe/London
RUN ln -snf /usr/share/zoneinfo/$TZ /etc/localtime && echo $TZ > /etc/timezone
RUN apt-get install -y libreadline-gplv2-dev libncursesw5-dev libssl-dev libsqlite3-dev tk-dev libgdbm-dev libc6-dev libbz2-dev

WORKDIR /code
RUN apt-get -y install python3-pip
RUN apt-get -y install python3-venv
RUN apt -y install python3-setuptools libffi-dev python3-dev
RUN apt install -y curl
RUN apt install -y unzip

RUN apt-get install -y build-essential swig

WORKDIR /code
RUN python3 -m venv .env
RUN . .env/bin/activate && pip install --upgrade pip && curl https://raw.githubusercontent.com/automl/auto-sklearn/master/requirements.txt | LC_ALL=C.UTF-8 xargs -n 1 -L 1 pip install
COPY requirements.txt requirements.txt
RUN . .env/bin/activate && pip install pyenchant && pip install -r requirements.txt

RUN apt install -y libgl1-mesa-glx
RUN apt-get install -y libglib2.0-0
RUN apt-get install -y libenchant1c2a

RUN mkdir embeddings
COPY . .
RUN curl -L http://nlp.stanford.edu/data/glove.6B.zip --output glove.zip
RUN unzip -o glove.zip -d embeddings/

RUN . .env/bin/activate && python nltk_install.py
CMD . .env/bin/activate && python main.py

ANSWER

Answered 2021-Feb-18 at 12:27

Changes to filesystem are not stored in docker image. They exist in container created from an image but if you use 'docker run' command a new container is created.

Source https://stackoverflow.com/questions/66256913

Community Discussions, Code Snippets contain sources that include Stack Exchange Network

Vulnerabilities

No vulnerabilities reported

Install auto-sklearn

You can download it from GitHub, GitLab.
You can use auto-sklearn like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

Support

For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .