HiFive_Paper | scripts necessary to produce the analyses

 by   bxlab Python Version: Current License: BSD-3-Clause

kandi X-RAY | HiFive_Paper Summary

kandi X-RAY | HiFive_Paper Summary

HiFive_Paper is a Python library. HiFive_Paper has no bugs, it has no vulnerabilities, it has a Permissive License and it has low support. However HiFive_Paper build file is not available. You can download it from GitHub.

This archive contains all of the scripts used to perform the analyses detailed in the HiFive paper. To run this, you can simply set the needed paths in the 'dependencies.txt' file in the 'Settings' folder and then use the command 'make all' in the top-level folder. Please note that this will take a long time.
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            kandi-support Support

              HiFive_Paper has a low active ecosystem.
              It has 3 star(s) with 0 fork(s). There are 3 watchers for this library.
              OutlinedDot
              It had no major release in the last 6 months.
              HiFive_Paper has no issues reported. There are no pull requests.
              It has a neutral sentiment in the developer community.
              The latest version of HiFive_Paper is current.

            kandi-Quality Quality

              HiFive_Paper has no bugs reported.

            kandi-Security Security

              HiFive_Paper has no vulnerabilities reported, and its dependent libraries have no vulnerabilities reported.

            kandi-License License

              HiFive_Paper is licensed under the BSD-3-Clause License. This license is Permissive.
              Permissive licenses have the least restrictions, and you can use them in most projects.

            kandi-Reuse Reuse

              HiFive_Paper releases are not available. You will need to build from source code and install.
              HiFive_Paper has no build file. You will be need to create the build yourself to build the component from source.

            Top functions reviewed by kandi - BETA

            kandi has reviewed HiFive_Paper and discovered the below as its top functions. This is intended to give you an instant insight into HiFive_Paper implemented functionality, and help decide if they suit your requirements.
            • Plot a subfig .
            • Find a multiresolution heat map .
            • Run find_binning_fend_fend_fend_corrections .
            • Plot scaling of two fragments .
            • Find the trans signal in the given region .
            • Find binning fragments using FiveC .
            • Find the CIS signal for a given region .
            • Perform iteration of iterative mapping .
            • Setup setup .
            • Plot a five - color heat map .
            Get all kandi verified functions for this library.

            HiFive_Paper Key Features

            No Key Features are available at this moment for HiFive_Paper.

            HiFive_Paper Examples and Code Snippets

            No Code Snippets are available at this moment for HiFive_Paper.

            Community Discussions

            No Community Discussions are available at this moment for HiFive_Paper.Refer to stack overflow page for discussions.

            Community Discussions, Code Snippets contain sources that include Stack Exchange Network

            Vulnerabilities

            No vulnerabilities reported

            Install HiFive_Paper

            You can download it from GitHub.
            You can use HiFive_Paper like any standard Python library. You will need to make sure that you have a development environment consisting of a Python distribution including header files, a compiler, pip, and git installed. Make sure that your pip, setuptools, and wheel are up to date. When using pip it is generally recommended to install packages in a virtual environment to avoid changes to the system.

            Support

            For any new features, suggestions and bugs create an issue on GitHub. If you have any questions check and ask questions on community page Stack Overflow .
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            CLONE
          • HTTPS

            https://github.com/bxlab/HiFive_Paper.git

          • CLI

            gh repo clone bxlab/HiFive_Paper

          • sshUrl

            git@github.com:bxlab/HiFive_Paper.git

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